Marinomonas pontica: MACH16_01670
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Entry
MACH16_01670 CDS
T09751
Name
(GenBank) DEAD/DEAH box helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH16_01670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpon03019
]
MACH16_01670
Enzymes [BR:
mpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MACH16_01670
Messenger RNA biogenesis [BR:
mpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MACH16_01670
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
UvrD-helicase
P-loop_SecA
Terminase_6N
HEM4
ERCC3_RAD25_C
Helicase_RecD
Motif
Other DBs
NCBI-ProteinID:
BDX01419
LinkDB
All DBs
Position
complement(182897..184144)
Genome browser
AA seq
415 aa
AA seq
DB search
MSFASLGLHQDILQQVQTLNYTTPTPIQQAAIPVVLQHKDLMAGAQTGTGKTAAFALPLL
HHILQNKPAETTAITVLVLTPTRELAQQVHASFVKYSENLPIQSVVAYGGASINVQLDAL
KQGCDVLVATPGRLLELIMKKLIDLSQLQTLVLDEADRMLDMGFIIDIQRILKTLPESRQ
TLFFSATFNDDIFALSKTLLKDPQLIEVDNRNTTANKVEQVVYAVDQNRKSALLSYLIGS
KNWQQVLIFTRTKQGADDLAKEMQKDGITTQSIHGDKSQGARERVLADFKSGKVRALVAT
DVAARGIDIEQLQYVVNHELPYNAEDYIHRIGRTGRAGANGLAISLVAEKERYLLTDIEK
LLNEQFIPQWFPGFEPDLNQLDNTPKKREPSKKELRAKALGLSPSKDKKPKRRRR
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgagctttgcgtcattaggacttcaccaagacattcttcagcaagtacaaacactcaac
tacacaacaccgacacctatccagcaagccgctattcctgttgtccttcagcacaaagat
ctgatggctggcgcacaaacagggacgggtaaaaccgccgcgtttgcgcttccgctgttg
caccatattctccaaaacaaaccggctgaaacaaccgccatcacagtgcttgttttgaca
ccaacacgtgaactagcacaacaagtccacgccagttttgtgaaatacagtgagaaccta
ccaattcaatctgtcgttgcctatggtggagccagcatcaatgttcagctcgacgcctta
aaacaaggttgcgatgtcttggtggctactccaggtcgcttgcttgaactgatcatgaaa
aaattgatcgatttaagccaactgcaaacccttgtgctggatgaagcagatcgcatgctc
gacatgggattcatcattgatatccaacgaatcttaaaaactctgcccgaatcacgtcaa
accctgttcttttccgcaacgtttaacgacgacatttttgcgctgagcaaaaccctacta
aaagacccgcaactgattgaagtcgacaatcgcaacacaaccgcaaataaagtcgaacag
gtggtgtatgccgttgatcaaaaccgcaaaagcgctctactttcttatttgattggctca
aaaaattggcaacaggtgctgatttttacgcgtaccaaacaaggcgcagacgacctcgcc
aaagaaatgcaaaaagacggtattacgacccaatccatccacggtgacaaatcccaaggg
gcgcgtgaacgtgtattggccgactttaaaagcggcaaagtgcgcgcacttgttgcgacg
gatgtcgcagcaaggggaatagacatagaacaactgcaatacgtggtaaatcacgaactg
ccatacaatgcggaagattacatccatcgaatcggacgtactgggcgtgctggcgcaaac
ggccttgccattagtttagtggctgaaaaagaacgttacctattaaccgacatcgaaaaa
ttactgaatgagcaattcattccgcagtggtttccagggtttgagcccgacctaaatcag
ctcgacaacacgccaaaaaaacgtgaaccatcgaaaaaagaactgcgtgcaaaagcgctg
gggctttccccatccaaagacaaaaaaccgaagcgtagaagacgctaa
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