Marinomonas pontica: MACH16_02680
Help
Entry
MACH16_02680 CDS
T09751
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpon03000
]
MACH16_02680
Transcription factors [BR:
mpon03000
]
Prokaryotic type
Helix-turn-helix
Other families
MACH16_02680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_lid_14
Mg_chelatase
AAA_5
AAA_2
HTH_8
AAA_3
HTH_22
HTH_7
PAS
HTH_29
nSTAND6
HTH_30
nSTAND3
AAA_7
TsaE
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
BDX01520
UniProt:
A0ABM8FBU7
LinkDB
All DBs
Position
294063..296078
Genome browser
AA seq
671 aa
AA seq
DB search
MQDEEKQKQQAELSRGSLDPQSMTTQSHKERIQASWYRCEQFGLEHGSRPDFATLPKGTL
TDLIDQHRSLLETTENEVLPYYENILSNSACMIVLADRQGHVLNTWGQPRFGSAAEHGLI
GGNQWTEMGVGTNAIGTALITGEAIQVGRDEHFLRANRFMVGSASPIYNTKNDLVGVLDI
SSDAYLPQDHTFGMVKLMSLSVENRLIFSAFQQEHFILSFNTNVVSLDSHWSGILVLDEN
GTIVSANRRAEVVLARDLALLNINQVFDIQMREIKHHPFSLPMKLIAMGRYQFYVKVIPP
VQQIMRVPDFRQRTDYVAPIQPEPLVMNEKKPELEKAEKVKKTDDIGVLDIPDNVIPLAE
LQHGDERVERLVRQAHKIMEKDIPILIHGETGAGKEIFVRSLHYHSSRSKEMLVAVNCAA
IPAELVESELFGYEKGAFTGAQNRGSIGLIRRAHRGTLFLDEIGEMPMAVQSRLLRVLQE
RVVTPLGSTEAFPVDIKLISATNRILKEEVKEGRFRQDLYYRISGLNIELPALRERTDKA
ELIRYLHERLRKEEPGPALSSDMLELLVRHPWPGNMRQLAHVLKVGMAMADEEELEEWHL
PDDFFDDLDAMGQVDDSASSKAASEQDEPLEDLIPRLLNEFKGNVSQTAKTAGVSRNTVY
KYAKLKDENEE
NT seq
2016 nt
NT seq
+upstream
nt +downstream
nt
atgcaagacgaagaaaaacaaaaacaacaagccgagctgagccgcggcagtctagacccg
cagtcaatgacaacccagtcacacaaagagcgaatccaagcgtcttggtatcgttgtgaa
caatttggtctggagcatggcagccgtccagactttgcaaccttgccaaaaggcactttg
acggatctaatcgatcagcatcgcagcctattggaaaccactgaaaacgaagtgctgcct
tactacgaaaatattctcagcaattccgcctgcatgattgttctggcggatcgccaagga
cacgtgttgaacacatgggggcaaccacgctttggcagcgctgcggaacacggcttgatc
ggtggcaatcagtggactgaaatgggcgtcggcaccaacgccattggcaccgctttgatc
actggtgaagcgattcaagtggggcgcgacgaacactttttgcgtgccaatcgttttatg
gtcggttcggcctcgcccatctacaacacaaaaaacgatttggtcggcgtgctcgacatt
tcttcagacgcgtaccttccacaggatcacacgttcggcatggtgaaactcatgtcgctc
agcgtggaaaatcgcctgatattttcggcttttcagcaagagcattttattctcagcttt
aataccaacgtggtcagtttggacagtcattggtcgggtattttggtattggatgaaaac
ggcacgattgtgtcggctaaccgtcgtgccgaagtggttttggctcgcgatttggctttg
ctgaacatcaatcaagtgtttgacattcaaatgcgggaaatcaaacatcatccattcagt
ttgcccatgaaattgatcgccatggggcgctatcagttttacgtcaaagtgattccgccg
gtgcaacaaattatgcgtgtgcctgacttccgtcagcgcacagattatgtggcaccaata
cagccagaaccccttgttatgaatgaaaaaaaaccagagcttgaaaaagcagaaaaggtc
aaaaagacagacgatattggcgtgcttgatatccccgataatgtgattcctttagccgaa
ctgcagcatggtgatgagcgtgtagagcgtcttgttcgtcaagctcataagatcatggaa
aaagacattcctattttgattcatggtgaaacaggggcgggaaaagagatatttgttcgc
agtttgcactatcatagctctcgttctaaagagatgttagtcgcagtaaactgcgcagcg
attccggcagaactagttgagtctgaactttttggttatgaaaaaggcgcttttactggc
gcacaaaatcgcggctctattggcctgattcgtcgtgcccatcgtggtacattatttctc
gatgagatcggtgaaatgccgatggctgtgcagtcgcgtttattgcgtgttttacaagaa
agagtagtcacaccgttgggttctactgaagcgtttcctgtggacattaaactgatttcc
gccaccaatcgcatcttaaaagaagaagtgaaagaagggcgctttcgccaagatttatat
tatcgaatctcagggttaaacatcgaattaccagcattacgtgaacgtaccgacaaggct
gaattgattcgttatttgcatgaacgtctgcgaaaagaagagcccggccctgctttatcg
tcagatatgcttgaattattggttagacatccttggccggggaacatgcgtcaactcgct
catgtattaaaagtcggcatggcaatggccgatgaggaagagctagaagaatggcatttg
cctgatgatttttttgacgacctcgatgccatggggcaagttgatgattcagcatcatca
aaggctgccagcgaacaagatgaaccgttagaagacttgatacctaggctcttaaacgag
ttcaaaggcaatgtctcgcaaaccgccaaaaccgctggagtgagccggaacacggtttat
aaatacgcgaagttaaaagacgaaaatgaagaatga
DBGET
integrated database retrieval system
