Marinomonas pontica: MACH16_08980
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Entry
MACH16_08980 CDS
T09751
Symbol
truD
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpon03016
]
MACH16_08980 (truD)
Enzymes [BR:
mpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
MACH16_08980 (truD)
Transfer RNA biogenesis [BR:
mpon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MACH16_08980 (truD)
Prokaryotic type
MACH16_08980 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Paramyxo_PNT
Motif
Other DBs
NCBI-ProteinID:
BDX02150
LinkDB
All DBs
Position
972731..973825
Genome browser
AA seq
364 aa
AA seq
DB search
MNTEWRYAWSKPAVTGNLKTYAQDFYVEEQLGFEPDGKGEFCFVFVEKEGVNTDFLAKRL
AQIAGIAPNKVTYSGVKDRHACTRQWFCLHVLNQEPDLSTIQEAFREPESVRVIAQLRHS
KKLRTGTHSANRFVIRLRDIQGDLDDLEGRLNLIKQAGVPNYYGPQRFGINGNNLHHGKD
FVLKGRQSRRKLTKTESFWLSAIRSWCFNEALSDQVENGMWMRLCDGDIAQFQHKDEQFR
VKEVSALMHLSVLRGGISPVLPMISEGWEAGTGAQREQVMKASLSDSTDLVDALIAFDLS
RDSRLARLVPMNMAWELLNDSEGNTQLIVEFSLTKGCFATSILREMIDFTDKSAEKFHEN
IDRE
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgaatggcgatacgcttggtctaagccagcagtgacaggaaacctgaaaact
tacgctcaggatttttatgtggaagagcagttgggttttgaacctgatggtaagggcgag
ttttgctttgtctttgttgagaaggaaggggtaaacacggattttttggcgaagcgcttg
gcccagattgctggtattgctccgaataaagtgacttacagtggtgttaaagaccgccat
gcttgtacgcgccagtggttttgtttgcatgttttgaatcaagaaccggatttatctacg
attcaggaggcattccgagagccagaaagtgtgcgagtgattgcgcagctacgtcattcc
aaaaagcttcgaactgggacgcattcagccaatcgttttgtgattcgtcttcgcgatatt
caaggggatcttgatgatttagaaggtcgtttaaacctcataaaacaagccggtgtgcct
aattattatggaccacagcgtttcggtataaacggtaataatttgcatcatggcaaagac
tttgttttaaaagggcggcaaagtcgccgcaaattgactaaaacggaatctttttggttg
tcggccattcgttcttggtgtttcaacgaagcgttaagtgatcaagtggaaaatggtatg
tggatgcgcttatgcgatggtgatatcgcgcagtttcagcataaagatgagcagtttcgg
gtgaaggaagtgagcgctttaatgcacttgagcgtcctgcgtggtggtattagccccgtt
ttacctatgatcagcgaaggctgggaagcggggacgggggctcagcgcgagcaggtgatg
aaagcgtccttgtctgacagtaccgatttggtggatgctttgattgcatttgacctttcg
agagacagtcgtttagcgcgacttgttcctatgaatatggcgtgggaattgcttaatgat
agcgaagggaatacacagctgattgttgaattttctttaacaaaagggtgttttgcgacc
agtatattgcgcgaaatgattgattttacggataagtcggctgagaagttccatgagaat
attgatcgcgaatga
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