Marinomonas pontica: MACH16_12140
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Entry
MACH16_12140 CDS
T09751
Symbol
hup
Name
(GenBank) DNA-binding protein HU-beta
KO
K03530
DNA-binding protein HU-beta
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpon03032
]
MACH16_12140 (hup)
03036 Chromosome and associated proteins [BR:
mpon03036
]
MACH16_12140 (hup)
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_12140 (hup)
DNA replication proteins [BR:
mpon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH16_12140 (hup)
Chromosome and associated proteins [BR:
mpon03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
MACH16_12140 (hup)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
MACH16_12140 (hup)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
FIMAH
HU-CCDC81_euk_1
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
BDX02466
LinkDB
All DBs
Position
1313100..1313372
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AA seq
90 aa
AA seq
DB search
MNKSELIDAIAASADLSKASASNALDATLKAIEAALAKGDQVTLVGFGTFAVKERAARTG
RNPQTGEEIQIKAAKVPGFKAGKGLKDAVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaaatctgaattgattgatgctattgcagcgtctgctgatttatctaaagcttct
gctagcaatgctcttgacgctactttaaaagcaattgaagcggctttggcaaaaggtgac
caggttacactagttggttttggtacttttgcagtaaaagaacgtgcggcacgtacaggc
cgtaatcctcaaactggtgaggaaatccaaattaaagcagcgaaggttcctggctttaag
gccggtaaaggtcttaaagacgctgtaaactaa
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