Marinomonas pontica: MACH16_13300
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Entry
MACH16_13300 CDS
T09751
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
KO
K03092
RNA polymerase sigma-54 factor
Organism
mpon
Marinomonas pontica
Pathway
mpon02020
Two-component system
mpon02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
MACH16_13300 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MACH16_13300 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpon03021
]
MACH16_13300 (rpoN)
Transcription machinery [BR:
mpon03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MACH16_13300 (rpoN)
BRITE hierarchy
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
BDX02582
LinkDB
All DBs
Position
complement(1447447..1448919)
Genome browser
AA seq
490 aa
AA seq
DB search
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLKQEIHEFLESNPLLELDDEEHTNSDTQ
ASIESKIATETPIETNSEEARLESEWTESIPEELSIDSNWDDTYQSSAAVSDSNSFESES
DFESRNAPAESIQDHLIWQLNLTHMSDRDIEIAYAIIECVQPDGYLSITPEDICESLSTE
LEELEIDEVIAVQHRLQRFDPVGVCSIDLRDCLLVQLEAFHSHPLFKSTYNLIDHYLPLL
GNRDFAQLSRKTKLKDEALKEVIHLIQQLNPRPGSVIDADDTDYVIPDVSVKKRNDVWQV
ELNNDALPPIKINETYSAMASTATTTEDATYIKTSLQEAKWFMKSLQSRNETLLKVASCI
VSRQIDFFELGEEAMKPMVLHDVAEEVGMHESTISRVTTQKYMHTPKGIFELKYFFSSHV
NTASGGECSSTAIRAMIKKLVSDEPAKKPLSDNKLAAILADQGIQVARRTVAKYREAMNI
PPSNERKRLI
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaagcagtctttgcaattaaaactcggtcaacagctgaccatgacgcctcaactgcaa
caagccattcgcttgctgcagctttctacgttggatttaaagcaagaaatccatgaattt
ttagagtccaatccacttcttgagctcgatgacgaagaacatacgaacagtgatactcaa
gcaagcatcgaatccaaaattgcaacagaaacaccaatagaaacaaacagcgaagaagcg
cgtttagaatctgagtggacagaaagcatcccagaagagttatcaatagacagtaactgg
gatgacacttaccaaagttctgctgccgttagcgacagcaatagctttgaaagtgaaagc
gattttgaaagccgtaacgcacccgctgaaagcatccaagaccaccttatttggcaattg
aatctgacccatatgtcggacagagacattgaaattgcttacgcgattattgagtgtgtg
cagcctgatgggtatttaagcattacacccgaggacatttgcgaatcactcagtacagag
ctagaagagctggaaattgacgaagttattgctgtgcagcaccgacttcagcgcttcgac
cctgttggcgtttgctctatcgatttacgagattgcttacttgttcaattggaagccttt
cacagccatccattattcaaaagcacttacaatttaatcgatcattacctaccactttta
ggcaatcgtgatttcgctcagctgagccgaaagacaaaactaaaagacgaagcgttaaaa
gaagttattcatttaattcaacagctaaaccccagacctggctcagttattgacgctgat
gacacagactatgtcatccctgatgtgtccgtcaaaaaacgcaatgatgtctggcaagta
gagctaaacaacgacgctctcccccccataaaaatcaacgaaacgtattctgcaatggcg
agtacagccaccacaacggaagatgcgacttacataaaaacatcgcttcaagaagccaag
tggttcatgaaaagccttcaaagccgaaacgaaacgttgttaaaagtggccagctgcatc
gttagtagacaaatagatttctttgaactgggtgaagaagccatgaaacccatggtactt
cacgatgtggccgaagaagtgggaatgcatgaatcgaccatttcaagggtgacaactcag
aaatacatgcacaccccaaaaggcatttttgaactaaaatactttttctcaagccatgta
aacacagcatcaggtggagagtgttcctctaccgccattcgcgccatgatcaaaaagctt
gtttcagacgaaccggcgaaaaaaccattaagcgacaataaactcgctgccattttggca
gaccaaggcatacaggttgccagacgaacggtagccaaatatcgtgaggcgatgaatatc
cctccttccaatgaacgaaaacgactgatctaa
DBGET
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