KEGG   Marinomonas pontica: MACH16_13300
Entry
MACH16_13300      CDS       T09751                                 
Symbol
rpoN
Name
(GenBank) RNA polymerase sigma-54 factor
  KO
K03092  RNA polymerase sigma-54 factor
Organism
mpon  Marinomonas pontica
Pathway
mpon02020  Two-component system
mpon02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:mpon00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    MACH16_13300 (rpoN)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    MACH16_13300 (rpoN)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mpon03021]
    MACH16_13300 (rpoN)
Transcription machinery [BR:mpon03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     MACH16_13300 (rpoN)
Motif
Pfam: Sigma54_DBD Sigma54_CBD Sigma54_AID HTH_IclR
Other DBs
NCBI-ProteinID: BDX02582
LinkDB
Position
complement(1447447..1448919)
AA seq 490 aa
MKQSLQLKLGQQLTMTPQLQQAIRLLQLSTLDLKQEIHEFLESNPLLELDDEEHTNSDTQ
ASIESKIATETPIETNSEEARLESEWTESIPEELSIDSNWDDTYQSSAAVSDSNSFESES
DFESRNAPAESIQDHLIWQLNLTHMSDRDIEIAYAIIECVQPDGYLSITPEDICESLSTE
LEELEIDEVIAVQHRLQRFDPVGVCSIDLRDCLLVQLEAFHSHPLFKSTYNLIDHYLPLL
GNRDFAQLSRKTKLKDEALKEVIHLIQQLNPRPGSVIDADDTDYVIPDVSVKKRNDVWQV
ELNNDALPPIKINETYSAMASTATTTEDATYIKTSLQEAKWFMKSLQSRNETLLKVASCI
VSRQIDFFELGEEAMKPMVLHDVAEEVGMHESTISRVTTQKYMHTPKGIFELKYFFSSHV
NTASGGECSSTAIRAMIKKLVSDEPAKKPLSDNKLAAILADQGIQVARRTVAKYREAMNI
PPSNERKRLI
NT seq 1473 nt   +upstreamnt  +downstreamnt
atgaagcagtctttgcaattaaaactcggtcaacagctgaccatgacgcctcaactgcaa
caagccattcgcttgctgcagctttctacgttggatttaaagcaagaaatccatgaattt
ttagagtccaatccacttcttgagctcgatgacgaagaacatacgaacagtgatactcaa
gcaagcatcgaatccaaaattgcaacagaaacaccaatagaaacaaacagcgaagaagcg
cgtttagaatctgagtggacagaaagcatcccagaagagttatcaatagacagtaactgg
gatgacacttaccaaagttctgctgccgttagcgacagcaatagctttgaaagtgaaagc
gattttgaaagccgtaacgcacccgctgaaagcatccaagaccaccttatttggcaattg
aatctgacccatatgtcggacagagacattgaaattgcttacgcgattattgagtgtgtg
cagcctgatgggtatttaagcattacacccgaggacatttgcgaatcactcagtacagag
ctagaagagctggaaattgacgaagttattgctgtgcagcaccgacttcagcgcttcgac
cctgttggcgtttgctctatcgatttacgagattgcttacttgttcaattggaagccttt
cacagccatccattattcaaaagcacttacaatttaatcgatcattacctaccactttta
ggcaatcgtgatttcgctcagctgagccgaaagacaaaactaaaagacgaagcgttaaaa
gaagttattcatttaattcaacagctaaaccccagacctggctcagttattgacgctgat
gacacagactatgtcatccctgatgtgtccgtcaaaaaacgcaatgatgtctggcaagta
gagctaaacaacgacgctctcccccccataaaaatcaacgaaacgtattctgcaatggcg
agtacagccaccacaacggaagatgcgacttacataaaaacatcgcttcaagaagccaag
tggttcatgaaaagccttcaaagccgaaacgaaacgttgttaaaagtggccagctgcatc
gttagtagacaaatagatttctttgaactgggtgaagaagccatgaaacccatggtactt
cacgatgtggccgaagaagtgggaatgcatgaatcgaccatttcaagggtgacaactcag
aaatacatgcacaccccaaaaggcatttttgaactaaaatactttttctcaagccatgta
aacacagcatcaggtggagagtgttcctctaccgccattcgcgccatgatcaaaaagctt
gtttcagacgaaccggcgaaaaaaccattaagcgacaataaactcgctgccattttggca
gaccaaggcatacaggttgccagacgaacggtagccaaatatcgtgaggcgatgaatatc
cctccttccaatgaacgaaaacgactgatctaa

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