Marinomonas pontica: MACH16_13770
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Entry
MACH16_13770 CDS
T09751
Symbol
xthA
Name
(GenBank) exonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MACH16_13770 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_13770 (xthA)
Enzymes [BR:
mpon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
MACH16_13770 (xthA)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
MACH16_13770 (xthA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_3
Motif
Other DBs
NCBI-ProteinID:
BDX02629
UniProt:
A0ABM8FEE6
LinkDB
All DBs
Position
complement(1493922..1494734)
Genome browser
AA seq
270 aa
AA seq
DB search
MKFVSFNINGLRARPHQIEALVEKHAPDVIGLQEIKVHDDAFPHDIPKSVGYHAYYYGQK
SHYGVAIFSKQEATSVEYGFPGDDEDAQRRMIIATFDTPQGPVKVLNGYFPQGESRDHET
KFPAKRKFYADLMDYLAAHSPDEKIIVMGDINISPTDLDIGIGEPNAKRWLKTGKCSFLP
EEREWFTTLSNWGLTDTYRQLNPEKNDRFSWFDYRSKGFEDTPKRGLRIDVIMSSNGLTP
FLKDSDVDYDLRALEKPSDHAPIWTSFDLD
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtctcttttaatatcaatggtttgcgcgcacgaccacatcaaatcgaagcc
ttagtcgaaaaacacgcaccggatgtgattgggctacaagaaataaaagtgcacgacgat
gcctttcctcacgacatccctaaatccgtcggctaccacgcttattattatggtcaaaag
tcccattatggtgtggcgatattcagtaaacaagaagccactagcgtagagtatggcttt
ccaggcgacgacgaagacgcgcaacgtcgcatgatcatcgccacgttcgacacaccacaa
ggtcctgttaaggtactgaatggctatttccctcaaggtgaaagccgagaccatgaaacc
aagtttcctgcgaaacgtaaattttacgcagaccttatggactaccttgcagctcactcg
ccagatgaaaagatcattgtcatgggagacatcaatatttcccctaccgatttagacatt
ggtatcggtgaacctaatgcaaagcgttggctaaaaacaggaaaatgcagctttttgcca
gaagagcgtgagtggtttaccaccctcagcaactggggactgacagacacctatcgtcaa
ttgaacccagaaaaaaatgaccgttttagctggtttgactatcgctcaaaaggctttgaa
gacacgcctaaacgcggtcttagaatcgatgtgatcatgtcatcaaatggattaacccct
ttcttaaaagattccgatgtcgattacgatttacgcgcccttgaaaaaccgtccgatcac
gctcctatctggacaagctttgatctagattaa
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