Marinomonas pontica: MACH16_14230
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Entry
MACH16_14230 CDS
T09751
Symbol
ycaO
Name
(GenBank) protein involved in RimO-mediated beta-methylthiolation of ribosomal protein S12 YcaO
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpon03009
]
MACH16_14230 (ycaO)
Ribosome biogenesis [BR:
mpon03009
]
Prokaryotic type
ribosomal protein modification factors
MACH16_14230 (ycaO)
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Paralog
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
BDX02675
UniProt:
A0ABM8FC66
LinkDB
All DBs
Position
complement(1550021..1552207)
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AA seq
728 aa
AA seq
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MEIKVNFLDNLRLEAKFDDFTITADQPIRYKGDGSAPSPFDYFLASSALCAAYFVKVYCK
ARDIPTDNIRLSQNNIVDPEDRYNQIFQIQVELPDDLSDKDREGILRSIDRCTVKKVVQT
GPEFKIEHVDNLDADANAMLMAQPDGAASTVILGKDLPLEQTIANMTAMLAELGMKIEIS
SWRNIVPNVWSLHIRDAASPMCFTNGKGASKESALCSALGEFIERLNNNFFYNDQFFGTE
IANSEFVHYPNEKWFPLEEDDALPVGLLDEYCLDIYNPDDELFGSHLIDTNSGNKARGIC
AIPYTRQSDGETVYFPSNLIENLFLSNGMSAGNNLLEAQVQCLSEIFERAVKRQIIEQEI
VLPDVPMQVLEQFPSILAGIQGLEEQGFPIVVKDASLGGQFPVMNVTLMNPKTGGVFSSF
GAHPSFEVALERSLTELMQGRSFEGLNDVPKPTFNSMAVSEPENFVEHFIDSTGVISWRF
FSSKHDYEFCEWDFSGTNEEEANTLFAILEDLGKEVYVAELTDLGASACRILVPDYSEVY
PVEDLVWDNTNKALDYREDILNLHSLSDEQLENLVNRLEESQLDNYTDIPTLIGIVFDEN
TIWGQLTIMELKILIYLALGAHEDALELVGEYLQFNDNTVQRGLFYQAMNAVLEVTLDDE
LELEDFRHNFNRMFGKDIMDNVVGSVTGEVRFYGLTKTSMQLEGIEPHLRLIESYKKLHQ
ARKANALN
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaagttaattttctcgacaatctcagactcgaagccaagtttgatgatttc
accatcaccgccgatcaaccgatccgctacaaaggtgatgggtctgcacccagtccattt
gattatttcttagcgtcctcagcgttgtgcgctgcgtattttgttaaggtgtattgcaag
gcgcgtgacatccctacggacaacattcggttgtcgcagaataatatcgtcgacccagaa
gatcgctataaccaaatatttcaaattcaagtcgagctaccagacgacctttccgacaaa
gaccgcgaaggcattttgcgctccatcgatcgctgtacggttaaaaaagtcgtacagact
ggccctgagttcaaaattgaacatgtagataacctagatgctgacgccaatgccatgctg
atggcacagcctgacggcgcagcaagcacagtgattttaggaaaagacttaccgctcgaa
cagaccattgctaacatgacggccatgttagcggaacttgggatgaagatcgaaatttca
tcgtggcgcaacatcgtccccaacgtatggtcacttcacattcgcgatgcggcctcgcct
atgtgcttcaccaacggcaaaggcgcaagcaaagagagcgcgttgtgttctgcgcttggt
gaatttatcgagcgcttaaacaacaattttttctacaatgaccaattttttgggacagag
attgcgaacagcgagttcgttcattacccaaacgaaaaatggttccctttggaggaagat
gacgccctacctgtcggcttactggatgagtattgtttggacatttataacccagacgac
gaattgttcggctcacatcttattgatacaaactctggcaataaagcgcgtggcatttgc
gctattccctatacgcgtcaatctgatggcgaaaccgtctatttcccctccaatttgatc
gagaatttatttttaagcaatggcatgagcgcaggcaataatttgctagaagcgcaagtt
caatgtttgtctgaaattttcgagcgcgcggtcaaacgtcaaattattgaacaagaaatc
gtattaccagatgtccctatgcaggttttggagcaatttcccagcatattggctggcatc
caaggtttagaagaacaaggcttcccgattgtcgtcaaagacgcctcgttaggtggacaa
tttccagtgatgaacgtcacgcttatgaatccgaaaacaggtggcgtattttcttctttt
ggcgcccacccaagctttgaagtagcgcttgaacgcagcttaacggaattaatgcaaggc
cgtagttttgaaggcctaaacgacgtacctaagcccacatttaatagcatggcggttagc
gagccagaaaattttgtggaacattttatcgattcaactggcgtaatttcatggcgcttt
tttagcagcaaacacgattacgaattttgtgagtgggacttctcaggcacaaacgaagaa
gaagccaatacgctttttgccatacttgaagatctggggaaagaggtttacgtcgcggaa
ttgaccgatttaggcgcttccgcttgccgcattctggtgccagattactccgaagtctat
cctgtggaagatctggtgtgggacaacaccaacaaagcattagattaccgtgaagacatt
ttaaaccttcactctttaagcgatgaacaactggaaaacctggtgaatcgacttgaagaa
agccaacttgataattacacagacattcccaccttgataggcatcgtgtttgatgaaaac
acaatctggggtcagttaactatcatggaacttaaaatcctcatctacttggcactgggt
gctcatgaagacgccctcgaactggtgggagaatacttgcaatttaacgacaacaccgtt
caacgtgggctattttaccaagcaatgaatgcggtactggaagtcacgttagacgacgag
ctggaactagaggacttccgacataacttcaatcgaatgtttggtaaagacattatggat
aatgtggtcggttctgtgactggcgaagtcagattctatggccttacaaaaaccagcatg
caactcgaaggaatagaaccgcatttgcgtttaatcgaaagctataagaaactgcaccaa
gctcgcaaagcaaacgcattgaattaa
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