Marinomonas pontica: MACH16_14690
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Entry
MACH16_14690 CDS
T09751
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpon03032
]
MACH16_14690 (topA)
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_14690 (topA)
Enzymes [BR:
mpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MACH16_14690 (topA)
DNA replication proteins [BR:
mpon03032
]
Prokaryotic type
DNA Topoisomerases
MACH16_14690 (topA)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MACH16_14690 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Ribosomal_L10
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
BDX02721
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Position
1596641..1599268
Genome browser
AA seq
875 aa
AA seq
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MGKSLVIVESPAKAKTINKYLGNDFVVKSSVGHIRDLPTGTTATSTPQERAKQAALTRKM
SPEEKLEYKSAKSRKQLISRMGVDPEKDWAAHYEILPGKEKVVDELKRLAKNADTIYLAT
DLDREGEAIAWHLREAIGGDDSRYKRVVFNEITKKAIKAAFETPSELDMNRVNAQQARRF
LDRVVGFMVSPLLWAKVARGLSAGRVQSVAVRLIVEREKEIRAFVPDEFWELDAMLATPA
KDVIKFEAAKYQNKEYHPVNKAQSDEHVARLNDAKYLVSSREDKPTSSKPSAPFITSTLQ
QAASTRLGYGVKKTMMLAQRLYEGGYITYMRTDSTNLSAEAVETLRGYIASNFGDAYLPA
EPIRYSSKEGAQEAHEAIRPSDVTVRVDDLLGMEKDAHRLYDLIRSQFMACQMTPAEYTS
TTITVTSGEYEFKAKGRILRFDGYTRAMQTVAKKGEDNILPDVEQGEFLSLQALLPEQHF
TKPVARFSEASLVKELEKRGIGRPSTYASIISTIQDRGYVRVENRRFYAEKMGDIVTERL
VDSFNSLMNFSFTAQMEEQLDDIAEGHKDWIKTLNAFYKDFSSVLAKAESPEGGMMLNEP
TPTDIECPTCSRPMQIRTASTGVFMSCSGYALPPKERCKATINLTRGDEAVAVDDEEGES
KALINKHRCQICGSAMDSYLMDEHRKLHVCGNNPACSGYEVETGVFKIKGYDGPTLECDK
CESEMQLKTGRFGKYFGCTNDECKNTRKLLKSGEAAPPKMDPVPMPDLACQKVEDHYVLR
DGATGLFLAASQFPRKRETRAPLVEELLPYMDQIDPKYHFFASAPKKDSEGRPTIIRYSR
KTKEQYVMTEEEGKPTGWKAFYVGTKWVIEEGKKK
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaatcactggttatcgtggaatcgccggctaaggcgaaaaccatcaataaatac
ttaggtaatgactttgttgtcaaatcgagtgtcggacacattcgagatttacctacaggt
acaacagcaacctctacacctcaagagcgtgcgaagcaggctgctttgacgcgaaaaatg
agcccagaagaaaagcttgaatacaaaagtgccaaatcacgtaagcagttgatttccaga
atgggcgttgaccctgagaaagactgggcggctcattatgaaatattgcctggcaaagaa
aaagtagttgatgaattaaaacgattggctaaaaacgctgacaccatctatctcgcaacc
gatttggatagagagggtgaggcgattgcttggcatctacgtgaagccattggtggcgat
gatagccgttataagcgtgtggtgtttaacgagattactaaaaaagccattaaagcggct
tttgaaacgccttccgagttggatatgaaccgtgtgaatgctcagcaggctcgacggttt
ttagatcgtgtcgtagggttcatggtatcgcctttactttgggcgaaagtagctcgtgga
ttgtctgctggtcgtgttcagtcggttgctgtgcgattaatagtcgaaagagaaaaagaa
attcgcgcgtttgttcctgatgaattttgggagttggatgcgatgctggcaacgccagcg
aaagacgtcataaaatttgaagcggcaaaatatcaaaacaaagaatatcaccctgttaac
aaggcgcaatcggatgagcatgttgctcgtttgaatgatgcgaagtaccttgttagtagt
cgcgaagataaaccaaccagcagcaagccgtctgcgccgtttattacatcgacacttcaa
caggctgccagcacgcgtctaggatatggcgttaaaaagaccatgatgctggctcagcgc
ttgtatgaaggtggttatatcacttacatgcgtaccgactcgacgaatttgagtgcggaa
gcggtagagacgttgcgtggctatattgcttctaattttggtgatgcgtatttgcctgca
gaaccaatccgttatagcagtaaagagggtgctcaagaagctcacgaagccattcgccct
tctgatgttactgttcgagtggatgacctgctcggtatggaaaaagacgcacatcgtttg
tacgacttgattcgtagtcaatttatggcgtgtcaaatgacaccggcagaatacacttct
acgactattactgttaccagtggcgagtatgagtttaaagccaaaggaagaattctgcgt
ttcgatggttacactcgtgcaatgcaaacggttgctaaaaaaggcgaagataatatcctg
ccagatgttgaacagggagagttcttgtcgttgcaagcacttttgcctgagcagcatttt
actaaacctgtcgcgcgttttagcgaagcaagtttggttaaagagcttgaaaaacgtggc
attggtcgcccttcaacctacgcatcaattatttctacgatccaggatcggggttatgta
cgcgtagagaatcgacgtttttatgctgaaaaaatgggtgatatcgttactgaacgtttg
gtagatagttttaactctttgatgaatttcagctttactgctcagatggaagagcagttg
gatgacattgctgaaggacataaagactggatcaaaacgcttaatgcattttataaggac
ttcagttctgtactggccaaagcagaatcgccagaaggtggcatgatgctgaatgagcct
actccgactgacattgaatgtccgacctgttcgcgacctatgcagattcgtacggctagt
acgggtgtgtttatgtcttgttctggttatgccttgccaccaaaagaacgctgtaaggca
accattaatttaacgcgtggtgacgaagccgttgcggtggacgatgaagagggcgaatca
aaagcgcttattaacaagcatcgttgtcaaatttgtggttctgcaatggacagttattta
atggatgaacaccgcaaactgcacgtatgcggtaataaccccgcttgctctggctatgaa
gtcgaaacgggtgtgttcaaaattaaaggttatgatggtcctacgcttgaatgcgataaa
tgtgaatctgagatgcagctaaaaactggccgatttggtaagtactttggttgcacgaat
gacgaatgtaaaaacacgcgtaaattgctaaagagcggtgaagccgcgcctcctaaaatg
gaccctgttcccatgcccgatttggcttgccaaaaggtagaggatcattatgttcttcgt
gacggtgcgacggggttatttttggcggcaagccaatttccacgtaagcgagaaacccgc
gctccgttagttgaagagttgctgccttatatggatcaaattgacccgaaatatcatttt
ttcgccagtgcgcctaaaaaagattcggaaggtcgacctactattatccgatatagtcgt
aagacaaaagagcaatatgtcatgacggaagaagagggtaagccgacgggctggaaggcc
ttctatgttggcactaagtgggttattgaagaaggtaagaagaaatga
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