Marinomonas pontica: MACH16_16520
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Entry
MACH16_16520 CDS
T09751
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03030
DNA replication
mpon03430
Mismatch repair
mpon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MACH16_16520 (holB)
03430 Mismatch repair
MACH16_16520 (holB)
03440 Homologous recombination
MACH16_16520 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpon03032
]
MACH16_16520 (holB)
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_16520 (holB)
Enzymes [BR:
mpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MACH16_16520 (holB)
DNA replication proteins [BR:
mpon03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MACH16_16520 (holB)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MACH16_16520 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
Fer2_2
Hpr_kinase_C
Motif
Other DBs
NCBI-ProteinID:
BDX02904
LinkDB
All DBs
Position
complement(1794324..1795262)
Genome browser
AA seq
312 aa
AA seq
DB search
MTHIADWLLPCLRQVQVLKQTNSLSHALLITGADGVGQEELAHEMVKDLMCESDQASACG
YCHSCQLMRADTHPDFRVLDGEASTIKVDQVRLLVRQISQKPQVGHNKVVLITHAQAMNI
NAANAVLKALEEPAARTYFVLTSSQSTSLLPTIRSRCLLVNVPTPSLDAVKTWLTQQPEG
EVLSSLFWLTTQPFRLLSIQQQGKTPIYLELPQKLSEMVHGRMPVSDVIKGMDSNNVEDY
CNGLAAILHQCICHSTGAPLDAALQGIFNVLVSRLGIQQLMLRYQSLQNLKSDLQKTNLN
PIMQLTHELNQW
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgacacatatcgcggattggctcttaccctgtttacgccaagtacaagttttaaagcaa
actaatagcctttcgcacgcgttgttgataaccggagcggacggtgtgggacaagaagag
ctggcccacgaaatggtgaaagacttgatgtgcgaaagtgaccaagcatcagcttgtgga
tactgccattcttgtcaattgatgcgagcggatacgcacccagactttcgtgttcttgat
ggtgaggcgtctacgataaaagtagatcaagttcgcttactcgttcgtcaaattagccaa
aagccccaagtgggccacaataaagtggtgctaattacccacgcacaagccatgaatata
aatgctgcgaacgccgtgcttaaggcgcttgaagagccagcggcacgaacttattttgtg
ttgacaagctctcaatcgaccagtttattgccaaccattcgaagccgttgccttttggtt
aacgtgccaacaccgagccttgatgcagttaagacatggctaacccaacaaccagaaggg
gaggttttgtcatctttattttggctaacgactcagccatttcgactattgtcgattcag
cagcagggaaaaacgccaatatatctggagttaccccaaaaactgagtgaaatggtgcat
ggcaggatgcctgtcagtgatgttattaagggtatggacagtaacaatgttgaagattac
tgcaatggattggccgccattttacatcagtgtatttgccactctacaggagcgccatta
gacgctgcgttgcaaggtatttttaacgtacttgtgtctcgattgggtattcaacaactt
atgttgcgttatcaatccctgcaaaatttaaagtcagaccttcaaaaaacaaacttaaac
cccataatgcaactaacacacgaattgaaccagtggtaa
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