Marinomonas pontica: MACH16_17240
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Entry
MACH16_17240 CDS
T09751
Symbol
sbcD
Name
(GenBank) nuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_17240 (sbcD)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MACH16_17240 (sbcD)
Archaeal homologous recombinant proteins
MACH16_17240 (sbcD)
BRITE hierarchy
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
DUF6875
Motif
Other DBs
NCBI-ProteinID:
BDX02976
LinkDB
All DBs
Position
complement(1881450..1882727)
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AA seq
425 aa
AA seq
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MKILHTSDWHLGQHFMGKSRRDEHKAFIDWLLALVDKESIDAVIIAGDVFDTGSPPSYAR
EMYHQLVLDMKARQCQLVIVAGNHDSVSMLNESKSLLTYLDTQVSSQANLDDIDSHVIPL
KDKKGEVSAWVCAVPYLRPKDVMQSVAGQSEQDKKLGLLQMIGDFYQRVFDAACEKNNAL
KTPVPIIGTGHLTAVGGQVSESVRDLYVGTLEALPTSVFPAFDYLALGHIHRAQPISKSG
RFRYSGSPIPLSFDELGRDKTVVIFDTALLDADTFVEDLFAESVDPVQLVTIPNFQPMAS
MKGNLKEVIKQISALELAEDKILWLEVTVIADEYLSDVHKRLLEVIDGKPIELLRVMRRS
AIEKKNEGFEARKTLSELTVGDVFEQSLKSNLELDEDESDILTELFNTCLVELKEHQQDG
EEKQS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattctacatacctcagactggcatcttggtcagcatttcatggggaaatcccga
cgtgatgagcacaaagcctttattgattggttattggcgctggtggacaaagagtctatt
gatgcggtgattatcgcgggggatgttttcgataccggttcgccaccaagctacgcgcga
gaaatgtaccatcagctggtattggatatgaaagcgcgccaatgccagttggtgattgtc
gcggggaatcacgattcggtcagtatgctaaacgaatccaagagcttgctgacctatctc
gatactcaagtgtctagccaagccaatcttgacgatatcgactcacatgtcattccgtta
aaagacaagaagggcgaggtttccgcttgggtttgtgctgtgccgtatttacgaccaaaa
gacgtgatgcaaagcgttgcagggcaatccgaacaagataagaaacttggtttgctgcag
atgataggtgatttttaccaacgagtgtttgatgctgcctgtgagaaaaataacgcactg
aaaacacctgtgccgattattggtactgggcatttaaccgcagtaggtgggcaagtgagc
gagtcggttcgtgacctttacgttggcactttggaagccttgccgacatcggtgtttccg
gcgtttgattatctggcgctggggcacattcatcgtgctcagccaatcagtaaaagtggt
cgatttcgttacagcggttcgccgattccattgagttttgacgaattagggcgtgacaaa
accgtggtgatattcgataccgctttgttagatgcagacacttttgttgaagatttgttt
gctgagtctgtggacccagttcagttggtaacgattccgaatttccagcctatggcgagt
atgaaggggaatttgaaagaggtaatcaagcagatttcagcgttggaattggcagaagac
aagatcctttggttagaggtgactgtgatcgctgatgagtatttgagtgatgtgcataag
cgcttgctggaggtcattgacggcaaacctattgagttgctgcgcgtgatgcgccgcagt
gcgatcgagaaaaagaatgaaggctttgaggcgcgtaaaaccttgtcggaattaaccgtt
ggtgatgtgtttgagcagagtcttaaatccaatttagaactggacgaagacgaatctgac
atcctgaccgagctgtttaatacgtgcttggtggagctgaaagagcatcagcaagacggt
gaggagaagcaatcatga
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