Marinomonas pontica: MACH16_17330
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Entry
MACH16_17330 CDS
T09751
Name
(GenBank) DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03420
Nucleotide excision repair
mpon03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MACH16_17330
03430 Mismatch repair
MACH16_17330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_17330
Enzymes [BR:
mpon01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MACH16_17330
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MACH16_17330
MMR (mismatch excision repair)
Other MMR factors
MACH16_17330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
PcrA_UvrD_tudor
AAA_22
AAA_30
Motif
Other DBs
NCBI-ProteinID:
BDX02985
LinkDB
All DBs
Position
complement(1891611..1893932)
Genome browser
AA seq
773 aa
AA seq
DB search
MIQAQPNIESTTSLTDEQHCVVAHDLISPAKVIAVAGAGKTTTLISRIEHLLAQGVDPSH
IGVFMFNKSAQEEFSERLSKRLMAAGHLRSPSVMTFHAFGMKFCRRLEQQGWLTSAKLVT
DDFSLVKMLREALQRLVRSGEKIAILDEKEWLEDVLLFVDQVKASDQPAQIVFEALGWSK
ERKFFPALYDELEKLRKRNNIRFFADLLSDPYELISELDDAERVRVRGLVPDFRYLLIDE
FQDINPCQYELLKLLYPAPCQWMIVGDVQQCIYEWRGASPDIMATQFDQDFANVATYPLS
TSFRFGHAVGLMASSVISENDPDALVIGAGERTRVSFARAPKTGKALLGELKSWVDEGRA
LSDTAVLVRLYSDMVPVQLALMHKGVPYQLHGDSPLLENRQIRMLMAYLAVIAGGLESPS
VFFHPDDIEYLLTVPSLGGSMAQRKTLIQQAKQSPHLLPQIIESVADATEGWRAKKLYER
ADWLRSLADAYNKQYRTDPGQGLAHTLEKLGIYRYFESTSSKDIQTQEKIATCDAFMAYV
RGVGGDAKSILEQLATLNEKQTDDSHGVHLMTIHKSKGLEFDQVLLSGLQEGRFPYYDED
LSAIDKQASSDLASERRLFYVAITRAKQKLVLLESPSTDEHKRMKQGDIPRAALKSLSLS
RFVFEAQPYAVSRICEAWYAEDTGTPIATEKGAVFQRYLRAVDPSPSLTFRHRVEGKSAL
QPGDKVRHDQFGQGIVVRQERDDKQMIFVDFGEVGLKRFNPKHTQLIKISSRA
NT seq
2322 nt
NT seq
+upstream
nt +downstream
nt
ttgatacaagcacaacctaacatcgagtcaaccacctcgttaacagacgaacaacattgt
gtggtagctcatgacctcatttcgccagcaaaagtcattgcggtcgcgggggcaggtaaa
acaacgacgttaatttctcgtattgagcatttgttagcacaaggcgtggacccgtctcac
attggcgtgtttatgtttaacaaaagcgcccaagaagagttttctgagcgtttaagtaag
cgactcatggcggcggggcatttgcgttccccgagcgtgatgacctttcatgcctttggt
atgaagttctgtcgacgcttggagcagcaaggttggctgacttctgcgaagttggtcacc
gacgattttagcttggtgaaaatgttgcgcgaagccttgcaacgtttggtgcgaagtggc
gagaaaattgcgattttggacgagaaagagtggcttgaagacgtgctgttatttgttgat
caagtcaaagcctccgatcaaccagcacaaatcgtttttgaggctttgggttggtcgaaa
gaacgtaagtttttccctgccctttatgacgaattagagaagctgcgcaagcgcaataac
atacgtttctttgccgatttactcagcgatccttacgaattaatcagcgaattagacgac
gcggagcgcgtgagagtgcgtggtttggtgccggattttcgttacctgttgattgacgaa
tttcaagacattaacccttgccaatatgaattgctcaaattgctttatcctgcaccttgc
caatggatgattgtcggcgatgtgcagcaatgtatttacgaatggcgcggtgccagtcca
gacattatggccacgcaatttgaccaagactttgccaacgtggcgacgtatccattaagt
accagctttcgttttggccatgcggttggtctcatggcgtcgagtgtcattagcgaaaac
gatcctgacgccttagtaatcggggcgggtgagcgtacgcgagtgtcttttgctcgcgct
ccgaagacgggcaaagctctgttgggcgagctgaaatcttgggttgatgaaggtcgtgca
ttgagcgacaccgcggtgttagtgcgcttgtacagcgacatggtgccagtgcaactcgcc
ttgatgcacaaaggcgtaccgtatcaattgcatggcgattctccgttgttggaaaatcgc
caaattcgcatgctaatggcgtaccttgccgtgattgctggcggtttggaaagtccaagt
gttttttttcatccagatgacattgagtatttgctgacggtgccgagtcttggtggttcc
atggcgcagcgtaaaaccttgattcaacaagccaaacaatctccgcatttattgccgcaa
attattgaatcggttgcggacgctactgaaggttggcgagcgaaaaaactctacgaacgt
gctgattggttacgcagtttagctgacgcttataataagcagtatcgcactgatcctggg
caaggtttggcgcatacgttggaaaagttgggcatttatcgctacttcgaaagcaccagc
agcaaagacattcagacccaagaaaaaatcgcgacctgcgatgcgtttatggcgtatgta
cgaggtgttggcggtgacgcgaaatcgattttggagcaactggcgaccttaaatgaaaag
caaacagacgacagtcatggcgtgcatttgatgacgattcacaagtcgaaaggcttggag
tttgatcaggtgttgttgtctggcttacaggaagggcgttttccgtattatgacgaggat
ttaagcgccatagacaagcaagcctccagtgatttggcttctgaacggcgtttgttttat
gtggcgattacccgtgccaaacagaagttagtcttgcttgaatccccaagcactgacgag
cataaacgcatgaagcaaggcgatattcctcgtgctgcgttaaagagtttgtctttgtcg
cgttttgtttttgaagctcagccgtatgccgtcagtcgtatctgtgaggcgtggtatgct
gaagacactggcacaccaattgctacggaaaaaggcgccgtgtttcagcgttatttgcgt
gccgttgatccttcgccgtccttgacctttcgtcatcgagttgaaggaaaaagtgcattg
cagcccggagacaaggtgcgccacgatcaatttgggcaaggtattgttgtccgacaagag
cgtgacgataaacaaatgatctttgtggattttggtgaggtgggtttaaaacgcttcaac
cctaagcacacacaacttataaaaatatcttccagagcttaa
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