Marinomonas pontica: MACH16_22580
Help
Entry
MACH16_22580 CDS
T09751
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mpon03032
]
MACH16_22580 (ihfB)
03036 Chromosome and associated proteins [BR:
mpon03036
]
MACH16_22580 (ihfB)
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_22580 (ihfB)
DNA replication proteins [BR:
mpon03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
MACH16_22580 (ihfB)
Chromosome and associated proteins [BR:
mpon03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
MACH16_22580 (ihfB)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
MACH16_22580 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
HU-CCDC81_euk_2
HU-DNA_bdg
Motif
Other DBs
NCBI-ProteinID:
BDX03510
LinkDB
All DBs
Position
complement(2467496..2467801)
Genome browser
AA seq
101 aa
AA seq
DB search
MTKSELIELLIDQQSHLPVKDVEQAIKAMLEHMSDSLANGERIEIRGFGSFSLHYRAPRI
GRNPKTGESVDLSAKYVPHFKPGKELRELVNLPDDEINELN
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaatctgagctgatagagctgctaatcgatcagcaatcccatttgccagtgaaa
gatgtagagcaagctattaaggcaatgctagaacatatgtctgattctttagcgaatggt
gaacgcattgagataagaggctttgggagtttttctctgcattatcgagcgccaagaatt
ggcagaaaccctaaaacaggtgaatctgttgatctaagtgcgaaatacgtgccgcatttt
aaaccaggtaaagagttgcgtgagttggttaatttgcctgatgatgagattaatgaactt
aactaa
DBGET
integrated database retrieval system
