Marinomonas pontica: MACH16_22660
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Entry
MACH16_22660 CDS
T09751
Symbol
recD
Name
(GenBank) RecBCD enzyme subunit RecD
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
MACH16_22660 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpon03400
]
MACH16_22660 (recD)
Enzymes [BR:
mpon01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
MACH16_22660 (recD)
DNA repair and recombination proteins [BR:
mpon03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
MACH16_22660 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
UvrD_C_2
Viral_helicase1
SH3_13
Helicase_RecD
AAA_11
UvrD-helicase
AAA_22
UvrD_C
AAA_16
AAA_17
AAA_28
nSTAND3
AAA
ADK
SLFN-g3_helicase
AAA_5
CbiA
Motif
Other DBs
NCBI-ProteinID:
BDX03518
LinkDB
All DBs
Position
complement(2474634..2476568)
Genome browser
AA seq
644 aa
AA seq
DB search
MDFSNQLGLLDALDEKALEESPSATTSFSLSAWQAKGVLRAIDCQWIEQLAQHAKESNPD
DNKSAVYIAGALCSAYLGAGHICIDLATIWQRPPEGIDLDELRTALHPSGVNSVSAWCES
LQASRLVSSATSLAERPMVLAGTRLYLYRYFQYEQQVLNYLKGQFSVAPYAVNADLLAQL
FPNQSDTVDWQQVAVANAASLPFSVISGGPGTGKTTTVTRLLALLVAQSFAEGKLLRIEL
AAPTGKAAARLTESISKAKADLPLSDDIKRAIPEQASTLHRLLGSDFGRSRFKHNKENPL
HLDVLLVDEVSMVDLPMMAKLIDAMPPHARLILLGDKDQLASVEAGSVLGDLSYGIEEVY
FQPEWAERLSHLTGENLAPFGNPSAPPISRALTLLRTSYRFDANSGIGHLAKAMNAGDSQ
AVLGCLQSNYADVEWRVPEEGQTKADIATLAKGYDNYWEAVRQNLDITKLYEVFSRYQIL
TAVRQGEFGVEKINAQLEQYFYQRGRVKDPHVWYPGKAVMLTRNDAALGLFNGDIGLCMP
DEFQRLRVWFMQPDGSFTGLLPSRLSEFEVVFAMTVHKSQGSEFDQVALLLPLTPSPVLT
KELLYTGITRAKKSFTLWGGSGLIRAATSTRIQRYSGLVSALWD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atggacttttctaatcagctaggtttgctcgacgctcttgatgaaaaagcgcttgaggaa
agtccatctgctacgacgtcattcagtttgtctgcttggcaagccaagggcgtgttaaga
gcgattgattgccagtggattgagcagctggcgcaacatgcgaaagaaagcaatccagat
gacaataagagcgcggtttatatcgctggcgctttgtgcagtgcgtatcttggtgcgggg
catatttgtatcgatctagcgaccatttggcaacgtccgccagaaggtattgatttagac
gagttacgaacggcattacatcctagcggcgtaaatagcgtttctgcttggtgcgaatct
ctgcaagcaagtcgcttggtgtcttctgcgacaagcttagctgaacgacctatggtattg
gcaggcacgcgtttgtatttgtatcgttattttcaatatgaacaacaagtgctgaattat
cttaaaggtcaattttctgttgcgccttatgctgtgaatgcagatttgttagcgcaacta
ttccctaaccaatccgatacagtggattggcaacaagtcgcggttgccaatgcggcgagt
ttgcctttctctgtgatcagcggtggtcccggaactggcaagacaaccactgtgacgcgc
ttgttggccttgctggtggctcaatcatttgcggaaggtaagttgttacgtatcgagctg
gccgcaccaaccggtaaagcggcggcgcgattgacggagtctatctcaaaggccaaagcg
gatttgccattaagcgatgacattaaacgtgccattcctgaacaagctagcaccttacat
cgcttattgggtagcgattttgggcgtagtcgatttaagcataataaagaaaatcctttg
catctggatgtgttgctggtggacgaagtgtccatggtggatttgcccatgatggcgaag
ttgattgatgccatgccacctcatgctcgactgattttattaggcgataaagatcaactc
gcctcggtagaagcgggcagtgtgttaggggatttatcttatggcatcgaagaggtttac
tttcaaccagaatgggctgagcgactaagtcatcttactggggaaaatctggcgccgttt
ggtaatccgtcggcaccgccaataagtcgagcgctgacattgctgcgcaccagttatcgc
tttgatgcgaatagcggtatcggtcatttggcaaaagcgatgaacgcaggtgatagccaa
gcggtattgggttgtcttcaatctaattacgccgatgtagagtggcgagtaccagaagaa
gggcaaactaaagctgatattgcgactcttgctaaaggttacgataactattgggaggcg
gtgcgccagaatctagacattaccaagctctatgaggtgttttcccgttatcagattttg
actgcggttcgccaaggcgagtttggtgtcgagaagatcaatgcgcaactagagcaatac
ttctatcagcgtgggcgagtaaaagacccgcatgtttggtatccagggaaagccgtgatg
ctaacccgaaacgatgcggcattggggctgtttaatggtgatatcggtctttgtatgcct
gatgaatttcagcgtcttcgtgtctggtttatgcagcctgatggctcttttaccggcttg
ttgccgagtcgtttgagtgaatttgaagtggtatttgcaatgacagtgcataaatcccaa
ggttctgagtttgatcaagttgctttgttgctgcctttgacgccatcgccagtcttgacc
aaagagttgctttatacaggcatcactcgggcgaaaaaatcgttcaccttgtggggaggg
agcggactcattcgggcagcaaccagtacacgcattcagcgatattctgggcttgttagc
gcgctttgggattga
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