Marinomonas pontica: MACH16_25320
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Entry
MACH16_25320 CDS
T09751
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH16_25320 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpon03019
]
MACH16_25320 (pnp)
03016 Transfer RNA biogenesis [BR:
mpon03016
]
MACH16_25320 (pnp)
Enzymes [BR:
mpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
MACH16_25320 (pnp)
Messenger RNA biogenesis [BR:
mpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MACH16_25320 (pnp)
Transfer RNA biogenesis [BR:
mpon03016
]
Prokaryotic type
tRNA degradation factors
MACH16_25320 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
KH-I_KHDC4-BBP
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
BDX03784
UniProt:
A0ABN6WPP6
LinkDB
All DBs
Position
complement(2745421..2747529)
Genome browser
AA seq
702 aa
AA seq
DB search
MSITTKTFQFGNDTVTLETGRIARQATGAVLCTIGDAQVLATVVGAKSAKAGQDFFPLSV
HYQERAYAVGKIPGGFLKREGRPSEKETLTSRLIDRPIRPLFPKGFMNEVQVVCTVMSTN
TNLDADIAAMLATSAALTISGIPFNGPIGAARVGFNDESGYVLNPSYSDLDGSLLDMVVA
GTKDAVLMVESEAQELTEDEMLGAVLYAHKEMQTAISAITEFAAECAKPRWDWEAEAANV
SLTDALQSGYAAQIEEAYGISEKMARYAQLGVVRDAAVAALVTEEGEFSEADVTGAFSKL
EKRIVRRRVIDGKPRIDGRDNKTVRPIDVEVGLLSKTHGSALFTRGETQAIATCTLGTSR
DSQMTDGLTGESKDSFMLHYNFPPYSVGECGRMGGVGRREIGHGRLARRGVQAVLPSEDE
FPYTIRIVSEITESNGSSSMASVCGASLSMMDAGVPLKAPVAGIAMGLIKEDDGFAVLTD
ILGDEDHLGDMDFKVAGTAEGITALQMDIKIEGINEEIMDIALSQALEARTHILREMAKV
IGYARPEVSPNAPSMATIKIDPEKIRDVIGKGGATIRSITEQTGASIDLDDDGTVRIYAA
DKASSDAALLKIHEITAEAEVDKLYKGKVVRLAEFGAFVNILPGKDGLVHISQIAEERIR
AVSDFLSEGQDVIVKVLDVDARGRIKLSMKDVTEEEKAAYTE
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
gtgagtattacgacaaaaactttccagttcggtaacgataccgtaacactagaaacaggc
cgcattgctcgtcaagcaacgggtgctgttctttgtacaattggtgatgcacaagtactt
gctactgttgtaggcgctaaatctgctaaagcaggtcaagacttcttcccattatctgtt
cattatcaagagcgtgcatacgcagttggtaaaattccaggtggtttcctaaagcgtgaa
ggtcgcccttctgaaaaagaaacactgacttctcgtttgatcgaccgtccaattcgtccg
ttgtttcctaaaggattcatgaacgaagttcaggttgtttgtacagtaatgtctactaac
acaaacctagacgcagacattgcggctatgttggcgacatctgcagcattgactatttct
ggtatcccattcaatggccctatcggtgcggctcgtgttggttttaacgacgagtctggt
tacgttcttaacccaagctactctgacctagacggctctttgctagacatggtggtagcg
ggcacgaaagacgcagtactgatggttgaatctgaagcgcaagagcttacagaggacgaa
atgctaggcgctgttctttacgctcacaaagaaatgcaaacagcgatttctgctattact
gaattcgcagcggagtgcgctaagcctcgttgggattgggaagcagaagcggcaaacgtt
tctttgacggacgctctacagtctggttacgcagctcaaatcgaagaagcgtacggaatc
agtgaaaaaatggctcgttacgctcagctaggtgttgttcgtgatgctgcagttgctgca
ctggttactgaagaaggcgagttctcagaagcggatgttactggtgcgttttctaaactt
gaaaaacgcatcgttcgtcgtcgtgttattgatggcaagccgcgtattgatggtcgtgac
aacaaaacagttcgtccaattgacgtagaggtgggtttgttaagcaaaactcacggttct
gctttgttcactcgtggtgaaactcaggcgattgcaacttgtactctaggcacgagccgc
gattcacaaatgaccgatggtctgactggcgaaagcaaagacagcttcatgcttcattac
aacttccctccttactctgtcggtgagtgtggacgtatgggtggtgttggtcgtcgtgaa
attggtcacggtcgtctagctcgtcgtggtgttcaagcggtattgccttctgaagatgaa
ttcccatacacaatccgtatcgtgtctgagatcactgaatctaacggttcaagctcaatg
gcgtcggtatgtggtgcgtctttgtctatgatggatgccggtgttcctcttaaagcacca
gttgcgggtatcgcaatgggtcttatcaaagaagacgacggctttgcggtattgactgat
atcttgggtgacgaagatcaccttggcgacatggactttaaagtggcgggtacggctgaa
ggtatcactgcgcttcaaatggacatcaagatcgaaggtatcaacgaagaaattatggac
atcgctttgagccaagcgcttgaagctcgtactcatatccttcgtgaaatggcgaaagtt
atcggttacgctcgtccagaagtttctccaaatgcgccttctatggcaacgatcaaaatt
gatcctgagaaaattcgtgacgttatcggtaaaggtggtgcgacaattcgttctatcact
gagcaaacgggtgcgtctatcgatctagatgacgacggtactgttcgtatttatgcggct
gataaagcgtcttctgatgcagctttgttgaagattcatgaaatcacagcagaagcagaa
gtggacaaactttacaaaggtaaagtggttcgtttggctgaatttggtgcattcgtaaat
atcttgcctggcaaagatggcttggttcacatttcacaaatcgctgaagagcgtattcgt
gcggtgtctgatttcttgtctgaaggacaagacgttatcgttaaagtactagatgttgat
gcgcgtggtcgtattaaactgtctatgaaagacgtaacagaagaagaaaaagcggcttac
actgagtaa
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