Marinomonas pontica: MACH16_25340
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Entry
MACH16_25340 CDS
T09751
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpon03016
]
MACH16_25340 (truB)
Enzymes [BR:
mpon01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
MACH16_25340 (truB)
Transfer RNA biogenesis [BR:
mpon03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
MACH16_25340 (truB)
Prokaryotic type
MACH16_25340 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
BDX03786
UniProt:
A0ABN6WQK2
LinkDB
All DBs
Position
complement(2748087..2749013)
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AA seq
308 aa
AA seq
DB search
MVKAKWRSVDGIVLLNKPIGLSSNQALQRVRRLYQAEKAGHTGALDPLATGMLPLCLGEA
TKFSQYLLDADKRYLTCIQLGKRTTTGDREGEVLTEELVPTLSDKSLEDILDGFRGEIEQ
IPPMYSALKHEGRPLYEYARQGIVIERKRRQVTISDLTLVSRTEDTLTLDIRCSKGTYIR
TIGEDIGEALGCGAHLHSLHRISTAGYLPEKMMSLEEFEAIAEQGYDALDAYLMPMDTAI
EHFEKVDLPEADTVNMMFGRTIPNTVSLENETIIRMYDRGSQRFLGLGQIKGAFIRPYRL
VNTSEFSL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggttaaagcaaaatggcgttcagtagacggtatcgttctactgaacaagccgataggt
ttaagttcgaaccaagcgttgcagcgtgtccgtcgtctttatcaagccgaaaaagcagga
catactggggcgcttgatcctttggcaaccggaatgttgccattgtgtcttggtgaggct
acaaagttttctcaatatttattggatgcggataagcgttaccttacgtgcattcaattg
ggaaagcgcacgacaacaggagatcgagaaggtgaggtgttaactgaagagttagtcccg
accctgagcgataaatctcttgaagacattctggatggatttcgtggcgaaattgaacaa
attccgcctatgtattcggcgttaaaacatgaaggtcgtcctttgtacgaatatgctcgt
caagggattgtcattgaaaggaaacgtcgtcaagttacgatttctgatctcactctagtt
tcaagaacagaagatacgctgacgcttgatatccggtgttcaaaaggtacctatatcaga
accataggcgaagatattggtgaagcactgggttgcggagcacaccttcactcattgcat
cgtatttcgacggcggggtatttgcctgaaaagatgatgtcacttgaagagtttgaggcc
attgctgagcaaggttatgacgcactagatgcttatttaatgccaatggatacggcgatt
gagcactttgaaaaagtggatttacctgaagccgataccgtaaatatgatgtttggtaga
accattccaaatacagtttctttagagaacgaaaccatcatacgaatgtacgatcgtggc
tcgcagcgcttcttgggccttgggcagattaaaggtgcttttattcggccttatagattg
gttaataccagtgagttctctttataa
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