Marinomonas pontica: MACH16_28580
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Entry
MACH16_28580 CDS
T09751
Symbol
pcnB
Name
(GenBank) poly(A) polymerase I
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mpon
Marinomonas pontica
Pathway
mpon03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MACH16_28580 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpon03019
]
MACH16_28580 (pcnB)
Enzymes [BR:
mpon01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
MACH16_28580 (pcnB)
Messenger RNA biogenesis [BR:
mpon03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
MACH16_28580 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
BDX04110
LinkDB
All DBs
Position
3120444..3121898
Genome browser
AA seq
484 aa
AA seq
DB search
MLTGLKSLVRKATSLFASPKAQTYPIIIPRSEHSLSRQDLSPNAVKVLYRLNKAGYDAYL
VGGCIRDHLIGIEPKDFDVVTNATPEQVHSIFSNSRLIGRRFKLVHVTFGREIIEVSTFR
ANTAQDDNDDETENTSQKSLKGLDSARSAHGIVLRDNVYGSIEEDAERRDFTFNALYYNV
QDFSIHDYCGGLKDIENKQIRIIGDARQRYQEDPVRMLRAIRFAGKLGFQIEAETAAPIK
EMAHLLDHIPPARLFEEVLKLLGSGNGIETFALLRQYGLFRYLFPDTDALLQSGWKRNDI
DPEAFILQGLKNTDDRIQSGKTTAPYFLYAVLLWPSVALRHEEFQAQGMPATPALHQAAN
MVLDNQVASTAIPRRFSTPMREIWDMQYRLPKRYGKRAFLLLEHPRFRAAFDFLLIRELS
GTELDGLGDWWEKFQHGTENQQRDLIKSIDSFAKEKDGPKKRRPRRRRKSNSNTTSPQRE
TFDE
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgctcacaggattaaaatctctggtacgtaaagctacctctctgttcgcctccccaaag
gcacagacttaccctattatcatacctcgcagcgagcacagcttatctcgacaagactta
agccccaatgctgtcaaagtattgtatcgccttaataaagcaggctatgacgcctaccta
gtcggtggctgtatccgagatcacctaattggcattgaaccaaaagatttcgacgttgta
accaacgcgacaccagaacaagttcacagtattttttcgaactccagactcattggtcgt
cgtttcaaactggttcacgttaccttcggacgtgagatcatcgaagtatctactttcaga
gccaatacagctcaagatgacaacgacgatgaaactgaaaacacctcacaaaaatcgttg
aagggactcgactccgcgcgctctgctcatggcatcgtactgcgtgacaatgtctatggc
agcattgaagaagacgccgaacgtcgcgacttcactttcaacgcactgtactacaatgtt
caagacttcagcatccacgactattgtggcggcctaaaagacattgaaaacaaacaaatt
cgcatcattggtgacgctcgccagcgctaccaagaagaccccgttcgaatgctccgcgcc
atccgttttgccggcaaacttgggtttcaaatcgaagccgaaaccgcggcgcctatcaaa
gaaatggctcacctgctggatcacattccgccggcacgtttattcgaagaagtattaaaa
ctgttaggcagcggtaatggcatcgaaacgtttgccctacttcgccagtacggcttattc
cgttatttattcccagacacagacgcccttttgcaaagtggctggaagcgcaatgacatc
gaccctgaagcgttcattttgcaaggtctaaaaaataccgacgaccgaatccaaagtgga
aaaacgacagcgccttacttcctatacgccgttttgctatggccaagcgttgcgcttcgc
cacgaagagtttcaagcgcaaggtatgccagccacacccgcattgcaccaggcggccaac
atggtattggacaaccaagtcgcctccacggccattccacgtcgattctctacaccaatg
cgtgaaatctgggacatgcaataccgcttaccaaaacgctatggaaaacgtgcatttctg
ctattagaacaccctcgttttcgtgctgcttttgacttcttattgattcgtgagttaagc
ggcactgaattggatggactgggcgattggtgggaaaaattccagcacggcacagaaaac
cagcaaagggaccttattaaaagtatcgactcatttgcaaaagaaaaagatggccccaaa
aaacgccgtccacgtcgtcgcagaaagagcaacagcaataccacatcgccacaaagagaa
acctttgacgaataa
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