Marinomonas pontica: MACH16_32050
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Entry
MACH16_32050 CDS
T09751
Symbol
ygdL
Name
(GenBank) tRNA threonylcarbamoyladenosine dehydratase
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
mpon
Marinomonas pontica
Brite
KEGG Orthology (KO) [BR:
mpon00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpon03016
]
MACH16_32050 (ygdL)
Transfer RNA biogenesis [BR:
mpon03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
MACH16_32050 (ygdL)
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Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
DAO
UDPG_MGDP_dh_N
NAD_binding_7
3HCDH_N
Pyr_redox_2
ELFV_dehydrog
ApbA
AlaDh_PNT_C
TrkA_N
FAD_binding_3
Spermine_synth
Shikimate_DH
Motif
Other DBs
NCBI-ProteinID:
BDX04457
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All DBs
Position
complement(3519065..3519841)
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AA seq
258 aa
AA seq
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MTDDQRFGGIRRLYGEAAYAAFSRAHVCVIGIGGVGSWAAEALARSGVGHITLIDMDDVC
VTNTNRQIHALSSTVGQSKVDVMAERVKQINPDCRVTCIEDFITPDNIPELLSEPFDYII
DCIDSIKPKAALVAWCKRNKRKLITVGGAGGQTDPTQIQIADLSRTEKDPLASKLRNFLR
RYYNFSRNTKRRFDIECVYSMEQLSYPQGDGTVSKQRLKGDTETKMNCDTGFGASTTVTA
TFGFVAVSRVLEKLASKA
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
ttgacagacgatcaacgatttggtggcattcgccgtttgtatggtgaagcggcatacgct
gctttttcgcgtgctcatgtgtgtgtcatcggtattggtggtgttggctcttgggcggct
gaggcgttagcgcgttctggggttggccacattacacttatcgatatggacgatgtttgc
gtcaccaataccaatcgccagattcacgcactaagcagtaccgttggtcaatctaaggtc
gatgtgatggcggaacgggttaaacagatcaaccccgactgtcgtgtgacgtgcattgaa
gacttcatcaccccagataacatacctgagcttctttctgagccgtttgattacattatt
gattgcattgacagtattaagccaaaagcggctctggtggcttggtgtaagcgtaacaag
cgcaaactcatcacagtcggtggtgctggtggtcaaacggacccaactcaaattcaaatc
gctgatttatctcgaacagaaaaagacccattggcgtcaaagctccgtaattttcttcgt
cgttattataactttagccgtaatacgaaacgtcgttttgatattgaatgtgtttattcc
atggaacagcttagctacccacaaggagatggaactgtatctaaacagcgattaaaagga
gatacagaaacaaaaatgaactgtgatactggctttggcgccagtacaacggtgaccgct
acttttggatttgttgcggtttctagagtcttggagaagttggcgagtaaagcctga
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