Micrococcus porci: KW076_09140
Help
Entry
KW076_09140 CDS
T09146
Name
(GenBank) Rne/Rng family ribonuclease
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
mpor
Micrococcus porci
Pathway
mpor03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpor00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KW076_09140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpor03019
]
KW076_09140
03009 Ribosome biogenesis [BR:
mpor03009
]
KW076_09140
Enzymes [BR:
mpor01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
KW076_09140
Messenger RNA biogenesis [BR:
mpor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
KW076_09140
Ribosome biogenesis [BR:
mpor03009
]
Prokaryotic type
rRNA processing factors
KW076_09140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
S1
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
UBH24048
LinkDB
All DBs
Position
complement(1936738..1939758)
Genome browser
AA seq
1006 aa
AA seq
DB search
MAADESTTQDTHETAEGSTTPVEATEEETAAEVAESPAGEAAEATAAPDVRFDPTNPFAV
PEGLLPLIEAETVERRRRRPAADPVPEGAADDAHADDEDDEDRPAVSRRRRRRRRGTVDM
ELAGGEDGDPEDTVTRVRAPRRALSTGPEAVQGVKGSTRLEAKRQRRRESRSGGRRRTVI
TEAEFLARRESVDRKMLVRQREHRIQIAVLEDGVLAEHFVSNTTQDSMIGNVYLGKVQNV
LPSMEAAFVDIGRGRNAVLYAGEVDWDAAQLDGKAKKIENALKSGDTVLVQVTKDPVGHK
GARLTSQISLPGRYLVYVPGGTMTGISRKLPDVERARLKKILKDHLPQDAGVIVRTAAEG
TSEQELQNDINRLRVQWEGIQEKASSTKTLAPELLYAEPDLTIKTVRDVFNEDFSAMLVQ
GEATWDSIEAYVTYVAPHLLDRLHHWVPEDHDGEDLYATHRVDEQLHKALERKVYLPSGG
SLVIDRTEAMTVVDVNTGKFTGSGGNLEETVTKNNLEAAEEVVRQLRLRDIGGIIVIDFI
DMVLESNQDLVLRRLVECLGRDRTKHQVAEVTSLGLVQMTRKRMGTGLVEVFSEVCEHCG
GRGILIQDTPVERNRWGHEHRAEPEARRRNKRRRGTESGEGGPAEPTAAELTEEERLRAE
RAAAARTALMSIAKASGKAADEEPSEEAAPRAEDAPEEAADEVRPSPAGDAEEQGESESG
GRRRKRRGRRRGRGRGGDDAARSAEEQDAPAEHPAEAAGEPAPAEAGAPDPAETATEDAD
ADSASDAPAAQAEADEDGRSGGRRRSRRRGGRRAESPQGSGAPASAPEASVEAEQDPEEP
AGAAEAEEALAAEEAPASPEPAAVVTFDGEPVAVPRRRRSRRATSDGVSAPRPSGMDALE
AAVDRRAEDAAAAAQRSPATPAATPTAAPEPAPAPVAGEGPAAAAPRRRSRRAVSADGAT
VQVQEGAAAGGGRFTAQAAQAAPAGETAAPVMLGVGVKAADIVRGE
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggacgagagcacgacgcaggacacccacgagacggccgaggggtcgacgacc
cccgtggaggcgacggaggaggagaccgcggcggaggtcgccgagtcccccgcgggggag
gccgccgaggccacggccgccccggacgtccggttcgaccccaccaaccccttcgcggtg
ccggaggggctgctgcccctgatcgaggcggagacggtggagcgccggcggcgccgcccc
gccgcggacccggtgccggagggcgccgccgacgacgcgcacgcggacgacgaggacgac
gaggaccgccccgcggtctcgcgtcgccgtcgccgtcgccgccgcggcaccgtggacatg
gagctcgccggcggcgaggacggcgaccccgaggacaccgtcacccgcgtgcgcgcccct
cgccgggccctgagcaccggcccggaggccgtgcagggcgtcaagggctccacccgcctc
gaggccaagcgccagcggcgccgcgagtcccgctcgggcgggcgtcgccgcaccgtcatc
acggaggccgagttcctggcccgccgcgagtcggtggatcggaagatgctggtccgccag
cgcgagcaccgcatccagatcgcggtcctggaggacggcgtgctcgcggagcacttcgtc
tccaacaccacgcaggactcgatgatcggcaacgtctaccttggcaaggtgcagaacgtg
ctgccgtccatggaggccgcgttcgtggacatcggccgcggccgcaacgccgtgctctac
gcgggcgaggtggactgggacgccgcccagctggacggcaaggccaagaagatcgagaac
gccctgaagtccggcgacaccgtcctggtgcaggtgaccaaggacccggtcggccacaag
ggcgcccgtctgaccagccagatctccctgccgggccgctacctcgtgtacgtgccgggc
gggaccatgacgggcatctcccgcaagctgccggacgtggagcgcgcccgcctgaagaag
atcctcaaggaccacctgccgcaggacgccggcgtgatcgtgcgcaccgcagccgagggc
acctcggagcaggagctgcagaacgacatcaaccgcctgcgcgtgcagtgggagggcatc
caggagaaggcgtcctccacgaagacgctggcccctgagctgctctacgccgagccggac
ctgaccatcaagacggtccgcgacgtcttcaacgaggacttctccgccatgctcgtccag
ggcgaggccacctgggacagcatcgaggcgtatgtgacctacgtggcgccgcacctgctg
gaccgcctgcaccactgggttccggaggaccacgacggcgaggacctctacgccacgcac
cgcgtggacgagcagctgcacaaggccctcgagcgcaaggtctacctgccctcgggcggc
tccctggtgatcgaccgcaccgaggccatgaccgtggtggacgtgaacaccgggaagttc
accggctccggcggcaacctcgaggagaccgtcaccaagaacaacctggaggcggccgag
gaggtcgtgcgccagctgcgcctgcgggacatcggcggcatcatcgtcatcgacttcatc
gacatggtgctggagtccaaccaggacctcgtgctgcgccgcctggtcgagtgcctgggc
cgggaccggaccaagcaccaggtcgccgaggtgacctcgctcggcctggtccagatgacc
cgcaagcgcatgggcaccggcctcgtggaggtcttctccgaggtctgcgagcactgcggg
ggccgcggcatcctcatccaggacacccccgtggagcggaacaggtggggccacgagcac
cgcgccgagccggaggcccgccggcggaacaagcgccgccgcgggaccgagtccggcgag
ggcggccccgccgagccgaccgcagcggagctcaccgaggaggagcgcctgcgcgccgag
cgcgccgccgccgcgcgcaccgccctgatgtccatcgccaaggcctccggcaaggccgcg
gacgaggagccctcggaggaggccgccccgcgggccgaggacgcgccggaggaggcggcg
gacgaggtgcgcccgtctcccgcgggcgacgccgaggagcagggcgagtccgagtccggc
ggccgtcgccgcaagcgccggggccgtcgtcgcggccgcgggcgcggtggggacgacgcg
gcccggagcgcggaggagcaggacgccccggccgagcaccccgcggaggccgccggcgag
cccgcgccggcggaggccggggcgcccgacccggccgagaccgcgacggaggacgccgac
gccgactccgcgtcggacgctccggccgcccaggccgaggcggacgaggacggtcgttcc
ggcggccgccgccggtcccgtcggcggggcggccggcgcgccgagtccccgcagggctcc
ggcgcgccggcgtccgctccggaggcctccgtcgaggccgagcaggacccggaggagccg
gcgggtgcggccgaggccgaggaggccctcgccgcggaggaggccccggcctcgccggag
cccgccgccgtggtcaccttcgacggcgagccggtggccgtgccgcgtcgccgacgctcc
cgacgggccaccagcgacggtgtgagtgccccgcgtccctccggcatggatgccctggag
gcggccgtcgaccggcgcgccgaggacgccgccgcggcggcacagcgctcgccggcgacc
ccggccgccacgccgacggcggctccggagcccgccccggccccggtggcgggggagggg
cccgccgccgccgcgccccgccggcggtcgcgccgggcggtgtccgcggacggcgccacg
gtgcaggtgcaggagggcgccgccgccggcggcggccgcttcaccgcccaggccgcgcag
gcggccccggccggggagaccgcggccccggtcatgctcggggtgggcgtcaaggccgcg
gacatcgtccgcggggagtga
DBGET
integrated database retrieval system
