Micrococcus porci: KW076_10355
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Entry
KW076_10355 CDS
T09146
Symbol
hrpA
Name
(GenBank) ATP-dependent RNA helicase HrpA
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
mpor
Micrococcus porci
Brite
KEGG Orthology (KO) [BR:
mpor00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpor03019
]
KW076_10355 (hrpA)
Enzymes [BR:
mpor01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
KW076_10355 (hrpA)
Messenger RNA biogenesis [BR:
mpor03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
KW076_10355 (hrpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
DEAD
HA2_C
AAA_22
AAA_19
WHD_HA2
nSTAND3
AAA_30
T2SSE
nSTAND_NTPase5
FtsK_SpoIIIE
PhoH
Myosin_head
SLFN-g3_helicase
Zeta_toxin
NACHT
Motif
Other DBs
NCBI-ProteinID:
UBH25896
LinkDB
All DBs
Position
2194311..2198405
Genome browser
AA seq
1364 aa
AA seq
DB search
MVRAMTDFPQPPAAAPVITFPAHLPVAERREEIMDAVRENQVVIVAGETGSGKTTQLPKM
LLALGLGGAGVVGHTQPRRIAARSVAERIAEELGEDVGRTVGYQVRFTAQTSTRTRVKVM
TDGILLAEIPHDPDLRKYSAIIVDEAHERSLNIDFLLGYLKRLLPRRPDLKVIITSATID
PERFARHFGTEDEPAPIIEVSGRTYPVEIRYRPLTEEPSPDDPDDDADDHAETRDPIDAV
GDAVLELAGEAPGDILVFFPGEREIREAADHLAGVVASTPRLAGTEVLPLYGRLSMAEQH
RVFGRAGAGVRRRIVLATNVAETSLTVPGIKYVIDTGTARISRYSHRTKVQRLPIERISQ
ASANQRSGRSGRTSDGIAIRLYSEEDFLSRPEFTDPEILRTSLASVILQMLSLGVADTPR
EVMDFPFVQPPDSRQVTDGAATLTELGALHADAPTRGGGRGRGKGAGNRSAAGTITDIGR
RLARLPVDPRLGRMILESGRRDCTREVMVLAAALTIQDPRERPVEQRQAADELHARFADD
RSDFSAYLNLWEYLREQQRELSGSQFRKLCRREHINWLRVHEWQDLVRQLRQLSKDVGVS
VHPGPVDPVGKHDDVHKSLLTGLLSQIGAYDERRREYQGARNTRFAVFPGSALFKKRHPF
VMAAELVETSRLWARAVARIEPEWIEEVAGDLVLRSYAEPHWSRKAGAAVAMEKVTLFGV
TIVPERSVRYGRIDPVLSRELFLRHALVEGDWRTRHRFFARNRRLLEEVDELETRLRRRD
LRVGDEELFAFYDARVPANVVSERHFDAWWKKARQETPDLLDLDLDALLTQDADELDTDA
FPTAFRYPLPGGDADLALDYTYDPTGASGTDGVTVAVPILLLNEVAPGPFAWLVPGLRGE
LVTALIKALPKAVRKNLVPAPDVARLLVEDLDAHADPLRDELPAALSSAVRRVRGAVVEP
ELWRLDAVPDHLRMDYRVVDARGAVMGAGQDLPALQARLAKANRSAIAARLAGTDDPRNA
RPGQGAGRGRGKTEPKGGDGGARGPAADTGRPGPSRTADGAPAFRERHGLTSWTVGEVPR
QITTAPGDRGPAITGYPSLIPETTADGSPAAGLVVARSAQDQAAWHRAGVIALLLATLPS
THRYVLDHLDNKEKLTFTQNPHGSVESLVRDATHVAVDRLVGTDLPFTEVGFRALFDRVR
ADLIDTVFAVTALVEQVLSRAAEVRRRLKGGVSLAMAPAKSDVQAHLEQLVFPGFLAATG
WQQLQHLPRYVQGMLARLDKLDAGGHLQRDGQHMAVVQGLEDEFDAAVTAHRSRFPGTPV
PAELERVRWLLEELRVSYFAQELGTAVSVSEKRVRQALAQARQG
NT seq
4095 nt
NT seq
+upstream
nt +downstream
nt
ctggtccgcgccatgaccgacttccctcagccgcccgcggccgcccccgtcatcaccttc
cccgcgcacctgcccgtggccgaacggcgcgaggagatcatggacgcggtccgcgagaac
caggtggtgatcgtggccggcgagaccggctcgggcaagacgacgcagctgcccaagatg
ctgctggcgctcgggctgggcggggccggcgtcgtgggccacacccagccgcggcgcatc
gcggcccgctccgtggcggagcgcatcgccgaggagctcggcgaggacgtcggccggacc
gtgggctaccaggtgcgcttcacggcccagacctcgacgcgcacccgggtgaaggtcatg
acggacgggatcctgctggccgagatcccccacgacccggacctgcggaagtactccgcg
atcatcgtggacgaggcccacgagcgcagcctgaacatcgacttcctgctgggctacctc
aagcgcctgctcccacgccggccggacctcaaggtgatcatcacctccgccacgatcgac
ccggagcgcttcgcccggcacttcggcaccgaggacgagcccgcccccatcatcgaggtc
tcgggccgcacctacccggtggagatccgctaccggcccctcaccgaggagccctccccc
gacgacccggacgacgacgccgacgaccacgccgagacccgcgaccccatcgacgcggtc
ggggatgccgtgctggagctggccggcgaggcccccggcgacatcctcgtgttcttcccc
ggcgagcgggagatccgcgaggcggcggatcacctggcgggcgtcgtcgcctccaccccg
cgcctggcgggcaccgaggtgctgccgctctacgggcgcctgtccatggcggagcagcac
cgcgtgttcgggcgggccggggccggggtgcgccgccggatcgtgctggccaccaacgtc
gccgagacctcgctgacggtgccgggcatcaagtacgtgatcgacacgggcaccgcccgc
atctcccggtactcgcaccgcaccaaggtccagcgcctgccgatcgagcggatctcccag
gccagcgccaaccagcgctcgggccgctccggccgcacgagcgacggcatcgcgatccgc
ctgtactccgaggaggacttcctgtcccggccggagttcacggacccggagatcctgcgc
acctccctggcctcggtgatcctgcagatgctctccctcggcgtggcggacaccccgcgg
gaggtcatggacttcccgttcgtccagccgccggactcccggcaggtcaccgacggcgcc
gccaccctcaccgagctcggcgccctccacgccgacgcgccgacgcgcgggggcggacgc
ggccggggcaagggggccgggaaccggtccgccgccggcaccatcacggacatcggccgc
cgcctggcccggctgcccgtggacccccgcctgggccgcatgatcctggagtccgggcgc
cgggactgcacccgcgaggtcatggtcctcgccgccgcgctcaccatccaggacccccgc
gagcgccccgtggagcagcgccaggccgcggacgagctccacgcccgcttcgccgacgac
cgctcggacttctccgcgtacctcaacctctgggagtacctgcgcgagcagcagagggag
ctctccggcagccagttccgcaagctctgccgccgcgagcacatcaactggctgcgcgtg
cacgaatggcaggacctcgtccgccagctgcgccagctgtccaaggacgtgggcgtgtcc
gtgcacccgggtccggtggacccggtgggcaagcacgacgacgtccacaagtccctgctg
accggcctgctctcccagatcggcgcctacgacgagcgtcgccgcgagtaccagggcgcc
cggaacacccggttcgcggtgttcccgggctccgccctgttcaagaagcgccaccccttc
gtgatggccgccgagctcgtggagacctcccggctctgggcgcgcgccgtcgcgcggatc
gagccggagtggatcgaggaggtcgccggggacctcgtgctgcgctcctacgccgagccg
cactggtcccggaaggccggagccgccgtcgcgatggagaaggtgaccctgttcggggtg
acgatcgtgcccgagcgcagcgtgcgctacggccggatcgacccggtgctctcccgcgag
ctgttcctgcggcacgccctcgtggagggcgactggcgcacccggcaccgcttcttcgcc
cgcaaccggaggctcctggaggaggtcgacgagctggagacgcgcctgcgccgccgcgac
ctgcgcgtgggcgacgaggagctgttcgccttctacgacgcgcgggtccccgcgaacgtc
gtctccgagcggcacttcgacgcgtggtggaagaaggcccgccaggagacgccggacctg
ctggacctggacctggacgccctgctcacccaggacgccgacgagctggacacggacgcc
ttccccacggccttccgatacccgctgcccggcggggacgccgacctggcgctggactac
acctacgacccgacgggcgcctccggcacggacggcgtcacggtggccgtccccatcctg
ctgctcaacgaggtcgctcccggcccgttcgcctggctggtgcccggcctgcggggggag
ctcgtgaccgccctcatcaaggcgctgcccaaggccgtgcgcaagaacctcgtcccggcc
ccggacgtcgcccgtctcctcgtggaggacctcgacgcgcacgccgacccgctccgggac
gagctgcccgcggccctctcctccgccgtgcggcgcgtccgcggggcggtcgtcgagccc
gagctgtggcggctggacgcggtcccggaccacctgcgcatggactaccgcgtggtggac
gcccgcggcgcggtcatgggcgccgggcaggacctgcccgccctgcaggcccggctggcg
aaggccaaccgctccgccatcgccgcccgcctcgccggcacggacgacccgcgcaacgcc
cgcccgggtcagggcgccgggcgcggccgcgggaagaccgagccgaagggcggggacggc
ggagcacggggccccgccgcggacaccggccgccccggcccgtcccggaccgccgacggc
gctcccgccttccgcgagcggcacgggctgacctcctggaccgtcggcgaggtcccgcgg
cagatcaccaccgcccccggcgaccgcggccccgcgatcaccggctacccctccctgatc
cccgagaccacggcggacgggtctccggcggcgggtctcgtcgtcgcgcgctcggcgcag
gaccaggcggcctggcaccgcgccggtgtgatcgcgctgctgctggccacgctgccgagc
acacaccggtacgtcctggaccacctggacaacaaggagaagctgaccttcacgcagaac
ccgcacggctccgtggagtcgctcgtgcgggacgccacccacgtggccgtcgaccggctg
gtgggcaccgacctgccgttcacggaggtggggttccgggcgctgttcgaccgcgtccgg
gccgacctgatcgacacggtcttcgccgtcaccgccctcgtggagcaggtgctgtcccgg
gccgcggaggtccgccgccgcctcaagggcggcgtgtccctggccatggccccggcgaag
tccgacgtccaggcgcacctggagcagctcgtgttccccggcttcctggccgcgaccggc
tggcagcagctgcagcacctcccccgctacgtgcagggcatgctggcgcgcctggacaag
ctcgacgccggcggtcacctgcaacgcgacggccagcacatggccgtggtgcagggcctc
gaggacgagttcgacgccgccgtcaccgcgcaccgcagccggttcccgggcacgccggtg
ccggccgagctggagcgggtgcggtggctcctcgaagagctgcgggtgtcctacttcgcg
caggagctgggcacggccgtctccgtgtcggagaagcgcgtccgccaggccctggcgcag
gcgaggcagggctga
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