Methanohalophilus portucalensis: BKM01_00775
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Entry
BKM01_00775 CDS
T09768
Name
(GenBank) recombinase RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03410
Base excision repair
mpot03430
Mismatch repair
mpot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BKM01_00775
03430 Mismatch repair
BKM01_00775
03440 Homologous recombination
BKM01_00775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mpot03400
]
BKM01_00775
DNA repair and recombination proteins [BR:
mpot03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
BKM01_00775
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BKM01_00775
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
BKM01_00775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH_CID
DHHA1
DHH
AstA
Motif
Other DBs
NCBI-ProteinID:
ATU07440
UniProt:
A0A2D3C404
LinkDB
All DBs
Position
complement(149980..151347)
Genome browser
AA seq
455 aa
AA seq
DB search
MKEHARECNTEIQKHESVYVVSHIDADGLTSAGIICKALQRAGINYEMRFVKQLDDNIIE
DIANINPQLAIFTDLGSGMLDSINANGINAIVSDHHQPRGEGKYHLNPHLFGANGSYQLS
GSGTTYILANEIGQNKDLVDIAMVGAIGDMQHLKKGHLTGVNRLLLEEGVKNGHLSYEKD
ITLFGKQTRPVYKLLQFSSDPFLPGLSGDEDACIGFLHDMNIRFGGDERWRRWIDLESAE
KQRIISGVMQHCIKSGLQPFKVERLIGEVYVLLNEREGTEMRDASEFSTLLNATARYDHA
ETGLAVCMGERGKAYEDAKKLLGEHRQNLVNGLKLVKENGITQLDHIQYFDAGNKIKETI
VGIIAGMSITSAGRRDKPIIAFADSDDGVKVSARGTQDLIRKGLNLSQAMSDAAGSVNGA
GGGHDIAAGATIPATGRNEFLNKLDEIIGSQFQKN
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacatgcaagagaatgtaatacagaaatacagaaacacgaatctgtatatgta
gtatcccacattgacgcagacggcctgacttctgccggaataatatgtaaagccctgcaa
cgtgcaggtatcaattatgaaatgaggtttgtaaaacagctggatgacaatatcatagaa
gacatcgcaaacataaatccgcaacttgcaatcttcacagatctgggaagcggcatgctg
gacagcataaatgcaaatggtatcaatgcaatagtttcagatcatcaccagcctcgcgga
gaagggaaatatcacctcaatccccatcttttcggtgctaacggatcatatcaattaagc
ggctccggaacaacctacatccttgcaaatgagattggccagaataaagatctggttgac
atagccatggttggtgctatcggagacatgcaacacctcaaaaaagggcatttgacaggt
gttaaccgcctgctacttgaagaaggagtgaaaaacggccatctgagttatgaaaaagat
atcaccctttttggcaaacaaacccgcccggtctataaactgctccaattttcttctgat
ccattcctgccgggcctgtcaggtgacgaggatgcatgcataggctttctccatgacatg
aatatccggtttgggggcgatgaacgatggagacgctggattgatcttgaatctgcagaa
aaacagagaataatatccggggtcatgcaacattgtatcaaatccgggcttcaacccttt
aaggttgagagattgatcggggaagtttatgtcctgctcaatgaacgtgaaggaacggaa
atgcgggatgcttccgaattttccacactgctcaatgccaccgcacgctatgaccatgca
gagaccggactggccgtatgcatgggagaacggggaaaggcttacgaggatgcaaagaag
cttcttggagaacacaggcaaaatcttgtcaacggcctaaaacttgtgaaagaaaatggc
attacacaactggaccacatacaatattttgatgcaggaaacaagatcaaagaaacgatt
gtaggaattatcgccggtatgagtattacttctgcagggagacgggacaagcctataatt
gcctttgcggattcagatgatggtgtgaaagtatccgcacggggaacacaggaccttatc
aggaagggactcaacctatcacaggcaatgtcagatgctgccggctccgtgaacggcgca
ggaggagggcatgacattgcagcaggagcgacaatacctgcaacgggcagaaacgagttc
ctcaataagctggatgaaataataggaagccaattccagaaaaactaa
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