Methanohalophilus portucalensis: BKM01_01075
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Entry
BKM01_01075 CDS
T09768
Name
(GenBank) RNA-binding protein
KO
K07573
exosome complex component CSL4
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM01_01075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpot03019
]
BKM01_01075
Messenger RNA biogenesis [BR:
mpot03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
BKM01_01075
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
BKM01_01075
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
ECR1_N_2
S1
HypA
DZR
Zn_ribbon_NUD
Zn_ribbon_3
Cas12f1-like_TNB
Ten1
CheY-binding
Zn_Tnp_IS91
DUF7130
Trm112p
Motif
Other DBs
NCBI-ProteinID:
ATU09194
UniProt:
A0A2D3C8W9
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All DBs
Position
complement(197175..197735)
Genome browser
AA seq
186 aa
AA seq
DB search
MEEQFVLPGDIVGTNEEYEAGEGTYTLRGNIYSTRTGNVEVDRKKRSVSVRATSELPPVI
KKDDIVVGNVVNVRDSMALVQIAAIKGHGEREVNNPGIAAIHISNIKEDYVKNIANELAL
MDVVKAKVIDTDSMRLSIAAKELGVMSAVCGRCGESLAIEEGKLKCPACGKTEKRKLSAD
YGTGII
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
attgaagagcagtttgtgctgcccggcgatattgttggtactaatgaagagtatgaagcc
ggtgaagggacctatacattaagaggaaacatatattcaaccaggacaggaaatgttgag
gttgacaggaaaaagcgtagtgtttccgtgcgggctacatccgaacttccacctgtaata
aagaaagatgatattgtagtcggcaatgtggtgaatgtacgtgattcaatggcacttgta
cagatagcagccataaaaggtcatggagaaagggaagtcaacaatcccggaattgccgcc
atccacatatcaaacatcaaggaagactacgtcaaaaacatagccaatgaacttgccctc
atggatgttgttaaggcaaaggtaattgatactgatagtatgcgcctgagcattgctgcc
aaggaactgggagttatgtccgcagtttgtggaagatgtggtgaatcccttgctattgaa
gagggaaaactgaaatgtcccgcctgtggcaagactgaaaaacgtaaactttcagctgat
tatggaacaggaattatctaa
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