Methanohalophilus portucalensis: BKM01_02845
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Entry
BKM01_02845 CDS
T09768
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
mpot
Methanohalophilus portucalensis
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpot03016
]
BKM01_02845
Enzymes [BR:
mpot01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
BKM01_02845
Transfer RNA biogenesis [BR:
mpot03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
BKM01_02845
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Gene cluster
GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
Sen15
Motif
Other DBs
NCBI-ProteinID:
ATU07808
UniProt:
A0A2D3C512
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All DBs
Position
complement(531893..532945)
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AA seq
350 aa
AA seq
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MIGKLKEDRVVAGKEAIEEIYETSYYGRPKKGNLILTLVEAAHLLYREKLEIETEGVSLG
FEEYFKSASLLNPNFELKYIVYKDLRERGFYVQPGVADFRVYPRGGKPGKSSSRSYVYVH
SERVALPLSVLLKNLESACNVRKQLIIAVVDEESDITYYEVQESDPAGNMEQLYPSLHTP
ATMLEDRVIVWDGEASGKLYENGFYGKPLDQKRLQLSLVEGAFLLKNNIIEVTTRKDDNK
LNFDDFCEKAAHIEPLFQRKYRVYEDLRNRKLVPKTGFKFGTHFRVYSEVKSSSKIPHSE
YLTHSIGTQHEFSLPVMSRAIRLANSVRKKMLFAIEADEIRHIDITRVKM
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
ttgattggaaaattgaaagaagacagggttgttgccggcaaagaggcaattgaagagata
tatgaaaccagttattacggcagacccaaaaaaggcaatttaatactcactctggttgaa
gcagcacacctgctttaccgtgagaaactcgaaattgaaactgaaggcgtatcacttgga
tttgaagaatatttcaagagtgcatccctgttaaaccccaattttgaactcaaatatatt
gtatataaggaccttcgagagcgtggtttttacgttcagccgggagttgcggacttcagg
gtatatccacggggcggcaaacccggaaaatcctcatccagaagttatgtgtatgtccat
tcggagagagttgcccttcccctgtccgttcttttgaaaaatctggaatcagcctgtaac
gtgcgtaaacagctcataattgcagttgtagacgaggaaagtgacattacctattatgaa
gtgcaggaatcagaccctgcaggtaatatggaacagctgtacccttcactgcatactcct
gcaactatgcttgaggatcgtgtcattgtctgggacggtgaagcttccggtaaactatac
gaaaatggtttttatggaaagcctctggatcaaaaaagactacagctgtcccttgtagaa
ggtgctttcctgctaaagaacaacataattgaagtaaccacacgaaaagatgacaataaa
ctcaattttgatgatttctgcgaaaaagccgcgcatatcgagccgcttttccagaggaaa
tacagggtatacgaagacctcaggaaccgcaaactcgtacctaaaaccggattcaaattc
ggtactcatttcagggtatacagcgaagtgaagtcctcatcaaagattccccattccgaa
tacctgacccattcgattggcacacaacatgaattttccctgccggttatgtcaagggca
atcaggctggccaacagtgtgcgtaaaaaaatgctctttgcaatagaagccgatgaaata
cgtcatattgatattacacgtgtgaaaatgtaa
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