Methanohalophilus portucalensis: BKM01_03230
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Entry
BKM01_03230 CDS
T09768
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mpot
Methanohalophilus portucalensis
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mpot03016
]
BKM01_03230
Enzymes [BR:
mpot01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
BKM01_03230
Transfer RNA biogenesis [BR:
mpot03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BKM01_03230
Prokaryotic type
BKM01_03230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_C_2
TruB_N
DKCLD
PUA
Pus10_C
RRM_occluded
Motif
Other DBs
NCBI-ProteinID:
ATU09226
UniProt:
A0A2D3C961
LinkDB
All DBs
Position
598484..599512
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AA seq
342 aa
AA seq
DB search
MGFLTNNINYDYDLTRQREYIIKGDAHTDPSYGCPPLKRPLSFYIRMGVVNLDKPAGPTS
HEVTAWVRDMLELPRAGHSGSLDPRVTGVLPIMLGKATKAVSALRLSAKEYICLMRLHDN
VPEERVRKVCDEFTGPIYQTPPVVSAVRRAIRIRNIYSLDVLEVEDNLVLFRVRCEAGTY
IRKLCHDIGLVIGCGAHMQQLRRVGTGPFDESSLVTLHDLKDAFVFWQENGDEEHLRRII
RPMEEALVHLPHITIRDSAVSAICHGAALTVPGIVGLDSDIQKEGDVAVFSLKGEVVALA
KASMDSSEILDLSSGIAAITERVIMDADVYPSRWNTKRMQRT
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
gtgggttttttaacgaataatattaattatgattacgatttaacccgacaaagggaatat
attatcaaaggagatgctcatacagacccgtcatatggttgtcctcctcttaagcgtcct
ctctctttttacatcaggatgggagtggtaaaccttgacaaacccgctgggcctacaagt
catgaggtcactgcgtgggtcagggatatgcttgaactccccagagcaggccattcaggt
tcactggatccacgggtgacaggtgtattgccgattatgctgggtaaggcaacaaaagct
gtctccgcacttcgcctttcagccaaggaatatatctgtcttatgcgcctccatgacaat
gttcctgaagaacgtgtgcggaaggtatgcgatgaatttaccggtcctatataccagacc
cctcctgtagtttcggcagtcaggcgtgctatcaggatacgcaatatctattccctggat
gtgctggaagttgaagacaatcttgtccttttcagggttagatgtgaggcaggaacctat
atacgcaaactctgtcatgatatcgggcttgtgattggttgtggggcccatatgcaacag
ctcagaagggttggcacaggaccatttgatgagtcatcgcttgtcactctgcatgacctg
aaagacgcttttgtattctggcaggaaaatggtgatgaagaacacttgcgtcgtattatc
agaccaatggaggaagctcttgtacacctgccgcatatcacaatccgtgattccgccgtg
agtgctatttgtcacggggcagcacttacagtaccgggtattgtcggtctcgattctgat
atccaaaaagagggtgatgttgccgtttttagtttgaaaggtgaagttgttgctcttgca
aaagcatcaatggactcctctgaaattctggatttatccagtggaattgctgctattacc
gaaagagtaataatggatgccgatgtttatccgagtcgctggaatacaaaacgtatgcag
cgtacatga
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