Methanohalophilus portucalensis: BKM01_03670
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Entry
BKM01_03670 CDS
T09768
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM01_03670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpot03019
]
BKM01_03670
03400 DNA repair and recombination proteins [BR:
mpot03400
]
BKM01_03670
Enzymes [BR:
mpot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BKM01_03670
Messenger RNA biogenesis [BR:
mpot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BKM01_03670
DNA repair and recombination proteins [BR:
mpot03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BKM01_03670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
RecQ_Zn_bind
HRDC
ResIII
Helicase_Sgs1
Motif
Other DBs
NCBI-ProteinID:
ATU07947
UniProt:
A0A2D3C5F4
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All DBs
Position
684030..685829
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AA seq
599 aa
AA seq
DB search
MRQTLYDYFGYKKFRPLQENIIQDVLDKKDVFVLMPTGGGKSLCYQLPSLLMEGVTVVVS
PLISLMKDQVDRLLSRGIAAAYMNSTLDNSEMNHVKDSLIRGQLDLLYVAPERLAMPSTL
KLLAKANVNLFAVDEAHCISQWGHDFRPEYRKLGALRSGFPDIPLIALTATATPAVARDI
AKQLNMVRSEKYVASFNRTNLYYEVKSGENADQQIISYLRSHPESCGIIYCQTRKSVEVL
AGRLKKLGVNAAFYHAGMSDELRHRAQEKFLNGTIRVVVATVAFGMGIDKSNVRFVIHYD
LPADLESYYQQTGRGGRDGQPCDCILFFKRGDWYKQQYFIEQMSSKKEREIALSKLRLMM
DYCETVTCRRKILLEYFGESTEKDCGHCDVCINPPQQVDVTEDALIIFKCIKELNQKFGA
THVASVVAGSKAKKIVSCGHHRLHCHGNGSHNPQDYWKDLSHRLSSLGFLEVKGGRYPVL
KLNKKSRAALNDGANVIIPQLSAAKNSKNKSSGQSKVSSKSSPVDCEYSKLFEKLRRLRL
QFAKRDNVPPYIVFADTSLKQMASSKPQTANQMLTITGVGKCKMEKYGDAFLSEIKSFC
NT seq
1800 nt
NT seq
+upstream
nt +downstream
nt
atgcggcaaaccctctatgactatttcggttataaaaaatttcgaccccttcaggaaaat
attattcaggatgtgctggataaaaaagatgtatttgtattgatgccaaccgggggtggg
aaatctttgtgttaccagttgccttccctgcttatggagggcgttactgtcgttgtgtcc
cctttgatatcccttatgaaagatcaggttgacaggttgctttcacgtggcattgccgct
gcctatatgaacagtacacttgacaattccgaaatgaaccatgttaaggattctctgatt
agggggcaactcgatcttctctatgtggcccccgaaagactggctatgccgtctactctt
aaattgcttgcaaaagcaaatgttaacctttttgccgttgatgaagcacattgtatatct
cagtgggggcatgatttcagacctgaatacaggaaattaggtgccctgcgctccggtttt
ccagatattcctctaatagcacttacagctactgctacccctgcagttgcccgtgatata
gcaaaacaactcaatatggtcaggtctgagaagtatgtagcaagttttaatcggaccaac
ctctattatgaggttaaatccggtgagaatgcagatcaacaaatcatatcttacctgcgc
tctcatcctgaatcatgtggaattatttattgccagacacgaaaatccgtagaagtactt
gctggcagactgaaaaaattaggagtcaatgctgcattctatcatgccggtatgtcagat
gaactgaggcaccgtgctcaggaaaagttcctgaatggaactataagggtagttgtggca
acagttgcatttgggatggggattgataagtccaatgtacgttttgttattcattatgat
ctgccagcggacctggaaagttactatcagcaaaccggcaggggtggcagggatggtcaa
ccatgtgattgtatcctttttttcaagagaggggattggtataaacagcaatacttcatt
gaacagatgtcttctaaaaaagaacgagaaattgccctttccaagttacgcctcatgatg
gattactgtgaaacagtcacctgtcgaaggaaaatcttactcgaatacttcggagagtcc
accgaaaaagattgtggtcattgtgacgtttgtattaacccgccacaacaggtggatgtt
acagaggatgcattaattatttttaagtgcataaaggagttgaaccagaaattcggggca
acacatgttgcatcggtagttgcaggttcaaaggctaaaaaaattgtgtcatgtggtcac
catcgactccattgtcatggtaatggttcccacaatccgcaagattactggaaagacctt
tctcatcggctttcctccctgggatttctggaagtgaaaggcggaagatatccggtctta
aagttaaataagaaaagccgtgcagctctcaatgatggtgctaacgtaattatacctcaa
ttatctgctgcaaaaaattcaaagaacaaatcatccgggcaaagcaaggtttcttcgaag
tcatctcctgttgattgtgaatattcgaagttatttgaaaaattgcgcagactccggttg
caatttgcaaaaagggataatgtgccaccctacattgtatttgcggataccagtttgaag
cagatggcctccagcaaaccccaaactgcaaaccagatgctcaccataacaggagtcggg
aaatgtaaaatggaaaaatatggtgacgcatttttgtcagagatcaaaagtttttgttga
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