Methanohalophilus portucalensis: BKM01_04175
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Entry
BKM01_04175 CDS
T09768
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BKM01_04175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpot03019
]
BKM01_04175
03009 Ribosome biogenesis [BR:
mpot03009
]
BKM01_04175
Enzymes [BR:
mpot01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
BKM01_04175
Messenger RNA biogenesis [BR:
mpot03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
BKM01_04175
Ribosome biogenesis [BR:
mpot03009
]
Prokaryotic type
rRNA helicases
BKM01_04175
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DeaD_dimer
ResIII
NAT10_TcmA_helicase
AAA_19
AAA_30
CMS1
PhoH
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ATU08042
UniProt:
A0A2D3C3K5
LinkDB
All DBs
Position
779607..780902
Genome browser
AA seq
431 aa
AA seq
DB search
MESLTFKDLNLSKNIERAVEDMGFEEPTPIQSQSIPYLMEGKDVIGQAQTGTGKTAAFGI
PALEMLDVKSKKVQVVVLCPTRELANQVAEEMSKLAKYQNTKMLPVYGGQPIDRQIKALR
RGVHIVIGTPGRVMDHIQRKTLKLDGVKMLVLDEADEMLDMGFREDIEFILSRVPGQKQT
VLFSATMPQPIIKLTKKYQQNPQMVKTVHKKLTVPQIEQFYFEVKNNAKTEVLCRLIDIY
NFKSSLVFCNTKKNVDKQVETLKARGYLADGMHGDMRQAQRERVMANFRKGEIETLVATD
VAARGIDVENIEAVFNYDIPQDEESYVHRIGRTGRAGKEGVAITFASGKDIRKIKDIQKH
TKAKITRKNVPSQSDVEDIRAEMLSQNVKKIIDDGHIGKYEHWVENLLEEDYASVDVAAA
LVKILLAEEKK
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atggaatcattaacttttaaagatttgaatttatcgaaaaatattgaacgtgcagttgaa
gacatgggttttgaggaacccacccctattcagtctcaatctattccctatcttatggaa
ggtaaggatgtaataggacaggcgcagaccggtaccggtaaaactgctgccttcggtata
cctgctcttgaaatgctggatgttaaaagtaagaaggtgcaggtagtggtcctctgtcca
accagagaactggcaaatcaggttgccgaggagatgagcaaacttgccaagtaccagaat
accaaaatgttaccggtttacggtggtcaacccatagacaggcagattaaggccctgaga
agaggcgtacacattgtaattggtactcccgggcgagttatggaccatatccagagaaag
acactgaaacttgacggtgttaaaatgctggtgctggatgaagctgatgaaatgcttgat
atgggtttcagggaggatattgaatttattctcagtcgcgtgcccggccagaaacagacc
gttctattttctgccacgatgccccagccaatcattaaactcacaaagaaataccagcaa
aaccctcaaatggtaaagactgttcataagaaactaacggtcccccagattgaacaattc
tatttcgaagtcaaaaacaatgcaaagaccgaagttttgtgccgtttgatagatatttac
aatttcaagtcatcccttgttttctgtaataccaagaaaaatgtcgataaacaggttgaa
actctcaaggcacgaggttatcttgcagatggaatgcatggtgatatgaggcaagcgcaa
agggaacgtgtcatggccaatttcaggaaaggagaaattgagacactcgttgcaaccgat
gttgctgcccgtggtatcgatgtggagaacatcgaggctgtttttaattatgacatccct
caggatgaggaatcatatgtccacaggataggcagaaccggtagggcaggcaaagaagga
gttgcaataacctttgcttccggtaaggacatccgtaagatcaaagatatacagaaacac
accaaggcaaagatcacaaggaaaaatgttccttcccagagtgatgttgaagatatcagg
gcggaaatgctgtcacaaaacgtcaagaagataatcgatgatgggcatattggcaaatat
gagcactgggttgaaaatttactggaagaagattatgcttcagtggatgttgcagctgcc
cttgtaaaaattctgttagcagaagagaagaagtaa
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