KEGG   Methanohalophilus portucalensis: BKM01_06885
Entry
BKM01_06885       CDS       T09768                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
mpot  Methanohalophilus portucalensis
Pathway
mpot03030  DNA replication
mpot03410  Base excision repair
mpot03420  Nucleotide excision repair
mpot03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mpot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKM01_06885
   03410 Base excision repair
    BKM01_06885
   03420 Nucleotide excision repair
    BKM01_06885
   03430 Mismatch repair
    BKM01_06885
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mpot03032]
    BKM01_06885
   03400 DNA repair and recombination proteins [BR:mpot03400]
    BKM01_06885
DNA replication proteins [BR:mpot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    BKM01_06885
DNA repair and recombination proteins [BR:mpot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     BKM01_06885
   MMR (mismatch excision repair)
    Other MMR factors
     BKM01_06885
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    BKM01_06885
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad9
Other DBs
NCBI-ProteinID: ATU08523
UniProt: A0A2D3C734
LinkDB
Position
complement(1335041..1335778)
AA seq 245 aa
MLEATIDASLLKDSIESLSVLVDEARVHISPEGIGVKAVDPANVAMVSFELQADAFDEYQ
AEESEIGLDLTRVLDILGVAEKTDKVKMKLEEDSRKLSISIGGISYTLTLLDPSTIRAEP
RIPQLELPAEIVVNGKGFSRTIKAAEKISDHMSMGVEGETFFLEAEGDTDRMRQEMPRDE
LISITPGPARSLFSLDYLSDIAKPASKSNEVTLQIGNDFPIKINFEIAGGRGKVGYLLAP
RIESE
NT seq 738 nt   +upstreamnt  +downstreamnt
atgttagaggcaacaattgatgcatcacttctgaaagattccattgaatcattatctgta
ttggttgacgaagcccgagtacacatctcacccgaaggtataggcgtgaaagctgtggac
ccggccaacgttgccatggtcagctttgaacttcaggctgatgcctttgatgaataccag
gcagaggaaagcgagattggtttagatcttacaagagtactggacatattgggtgtcgcg
gaaaaaacggacaaagtgaagatgaaactggaagaggattccaggaaactctccataagc
attggcggaatatcatatacacttacattgcttgacccgtctacaatccgcgcagaaccc
aggataccccagcttgaactgcctgcagagatcgttgtgaacggtaaaggattcagcagg
accataaaagcagccgagaaaataagtgaccatatgtcaatgggagttgaaggagaaacc
ttcttcctggaagcagaaggcgacacggatcgtatgcgtcaggaaatgccccgtgatgaa
ctgataagcatcacaccgggacctgcaagatcattattttccctggattacctttctgac
atagcaaaacctgcctctaaatccaatgaggtaaccctccagataggaaatgatttccct
atcaagatcaattttgaaattgcaggtggaagaggcaaggtcggatatctgctggccccc
agaatagagtctgagtaa

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