Methanohalophilus portucalensis: BKM01_07645
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Entry
BKM01_07645 CDS
T09768
Name
(GenBank) DNA-directed RNA polymerase subunit B
KO
K03044
DNA-directed RNA polymerase subunit B' [EC:
2.7.7.6
]
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
BKM01_07645
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpot03021
]
BKM01_07645
Enzymes [BR:
mpot01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
BKM01_07645
Transcription machinery [BR:
mpot03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
BKM01_07645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_7
RNA_pol_Rpb2_4
RNA_pol_Rpb2_5
Zn_ribbon_NUD
DUF1451
Zn_Ribbon_TF
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
ATU09295
UniProt:
A0A2D3C9D2
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All DBs
Position
1486523..1488337
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AA seq
604 aa
AA seq
DB search
MTDAKVFLNGELIGTHPDPVNLVEDIRKQRRAGMLSRQVNVALYEDIHEVIINSDIGRAR
RALVVVENGLPLVTEDHIDKLKSGDLTSADLIRQGRIEYLDAEEEENSYVALYESDITPK
HTHLEIDPSLILGICAGMVPYPEHNASPRITMGSAMIKQCIGVSTSNLKLRPDTRAHVLH
YPQKALTRTQTCESINFDERPAGQNFVVAVMSYEGYNIEDALVFNKGSIERGLGRSHFLR
TFEGEERRYPGGQEDKFEIPDSEYRGARSAEAYANLDVDGLVNPETTVGPNSVLIGKTSP
PRFLEEQTDFGITVEQRRESAITMRSNERGVVDTVLLTESINGTRLTKVKVRDQRIPEIG
DKFASRHGQKGVIGLIVPYHDMPFTESGMVPDLVINPHAIPSRMTVAHVLEMIGGKVGSV
EGRRINSTAFSGEKEDDLRSGLQKHGFSHTGKEVFYDGVTGKKVQADIFVGVILYQKLHH
MVASKMHARSRGPVQVLTRQPTEGRAREGGLRFGEMERDVLIGHGAAMTLKERLLDESDK
VEELVCSNCGMIATFDRRRNVRYCSNCGSETDIHRVEMSYAFKLLLDEIKSLGVAPRLRL
DDAV
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatgccaaagtattcctgaatggtgaattaataggcacgcatcctgatcctgtc
aatcttgtggaagatattcgcaagcaaagaagggccggtatgctttccaggcaggtaaat
gtagccctttatgaagatattcatgaagtgatcatcaattccgatataggtagggcaaga
agggcacttgtagtagtagaaaacggcctgcctcttgttactgaagaccatattgataaa
ctcaaaagcggagatttgacgagtgcagatctcatcaggcagggtcgtattgaatacctg
gatgccgaagaagaagaaaattcatatgtggctctctacgagagtgacatcactcccaaa
cacacacaccttgaaatagatccctctctgattctgggtatctgtgcaggtatggtccct
tatccggaacataatgcatccccaaggattaccatgggttcggctatgatcaaacaatgt
attggtgtgtccacttccaacctgaaactcaggcctgatacccgtgcacacgtgttacat
tacccccagaaagcactcacacgcacgcagacatgtgaatcaattaactttgatgaaagg
cctgcgggtcagaacttcgttgtggctgtaatgtcctatgaaggttataatattgaagat
gcactggttttcaacaaaggatccattgaaagaggccttggtagaagccacttcctcagg
acttttgagggcgaagaacgtcgttatcccggtgggcaggaagataaatttgagattccc
gattcggaatacaggggtgcacgtagtgcggaagcctatgcgaacctggatgttgacggt
cttgtcaatccggagaccacagttgggcctaattcagtattgatcggtaagaccagtcct
cctcgtttccttgaagaacaaacggatttcggtatcaccgtagaacagagaagggaaagt
gcaatcaccatgcgttccaatgaaaggggtgtggttgatactgtccttcttacagaatcc
attaacggtaccaggctcaccaaggtaaaggtcagggatcagaggattcctgagatcggt
gacaagtttgcttcaaggcacggtcagaaaggagtaatcggacttatagttccatatcac
gatatgcccttcacagaatccggaatggttcctgatcttgtaatcaatcctcatgcaatc
ccttcgcgtatgacagttgcacatgttctggaaatgatcggtggtaaagtaggatctgta
gaaggaagacgtatcaattcaactgccttttccggagaaaaggaagatgacctgcgttca
ggtttacagaaacatggtttttcacacactggtaaagaagtcttttacgatggtgtgacc
ggtaaaaaggtccaggccgatatctttgttggtgttattctttatcagaaactgcaccac
atggtagcatccaagatgcatgcaaggtcccgtggtccagttcaggttctcacacgccag
ccaaccgaaggacgtgcccgtgaaggtggtctgcgatttggtgaaatggaaagggatgta
cttattggtcatggtgcagcgatgacccttaaggaacgattgcttgatgaatctgataag
gttgaagagcttgtctgtagtaattgtggcatgatcgcgacctttgatcgcaggcgtaat
gtgaggtactgttcaaactgtggatcggaaacggacatccaccgtgtagaaatgagctat
gcattcaagcttttgcttgatgaaatcaaatcccttggagtagctccgaggctcagactt
gatgatgctgtgtga
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