KEGG   Methanohalophilus portucalensis: BKM01_10555
Entry
BKM01_10555       CDS       T09768                                 
Name
(GenBank) replication factor A
  KO
K07466  replication factor A1
Organism
mpot  Methanohalophilus portucalensis
Pathway
mpot03030  DNA replication
mpot03420  Nucleotide excision repair
mpot03430  Mismatch repair
mpot03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mpot00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    BKM01_10555
   03420 Nucleotide excision repair
    BKM01_10555
   03430 Mismatch repair
    BKM01_10555
   03440 Homologous recombination
    BKM01_10555
   03460 Fanconi anemia pathway
    BKM01_10555
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mpot03000]
    BKM01_10555
   03032 DNA replication proteins [BR:mpot03032]
    BKM01_10555
   03400 DNA repair and recombination proteins [BR:mpot03400]
    BKM01_10555
Transcription factors [BR:mpot03000]
 Eukaryotic type
  Zinc finger
   Cys2His2 others
    BKM01_10555
DNA replication proteins [BR:mpot03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RPA (replication protein A)
    BKM01_10555
DNA repair and recombination proteins [BR:mpot03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    RPA (replication factor A)
     BKM01_10555
   MMR (mismatch excision repair)
     BKM01_10555
  DSBR (double strand breaks repair)
   HR (homologous recombination)
     BKM01_10555
SSDB
Motif
Pfam: tRNA_anti-codon REPA_OB_2 CDC24_OB3 Ssb-like_OB OB_MEIOB_N SHLD2_OB1 DUF3127 SHOCT
Other DBs
NCBI-ProteinID: ATU09164
UniProt: A0A2D3C8T6
LinkDB
Position
complement(2070480..2071604)
AA seq 374 aa
MDDIDTVYEKLEGIISREEFEAKVEEKIEEMHNLCDVQTAALLVAHNLGATEAGVETIKI
ADINEASSNVNFTGKAVSVFEPKEFSRDDGTTGRVGNIIVADETGSIRVTLWDDLADLLK
TGDISAGKSYNISGYAKEGYSGIEVNIGRGGGISESEENVKANINLSGISEIKDGDSDVN
VVGMVLDVSDVRTFQKRDGSEGRVRNITIGDETGKIRITLWDGRTELADKLETGDSVEII
NGYARLNNYSQEVEIQVGNHSSLRKTDREVEFEEDYTPIADIIPGQPYSIKGAVSGMGDL
KEFSRSNGSEGKVSNIYVSDETGRIRIALWDEKAELVDKVDIDTPIKIIDAFAKSGFNEE
VELNAGGRSKVIVS
NT seq 1125 nt   +upstreamnt  +downstreamnt
atggacgatatcgatacagtatatgaaaaactggaaggcataatttccagggaagaattt
gaagcaaaggtagaggaaaaaatagaggagatgcataacctctgtgatgtccagacagcc
gccctgctggtagcacataacctcggtgctacggaggcgggcgttgagacgatcaagatt
gcagacataaatgaggcatcatccaacgtgaatttcacaggaaaggccgtttctgttttt
gaaccaaaggaattcagccgtgatgatggcaccacaggcagggttggaaatattatagtg
gcggatgaaacaggttcgatcagggtaaccctctgggatgatcttgcagaccttttgaaa
accggggatatcagtgccggtaagagttacaatatcagtggctacgccaaagaaggttat
tcaggaattgaagtgaatatcggcagagggggaggcatttctgaaagtgaggaaaatgtc
aaagcaaatattaacctctccggtatctcggagataaaggacggggattctgatgtaaat
gtcgttggaatggtgctggatgtatcggatgtgcgtactttccagaaacgtgatggttct
gaaggacgggtacgcaacattacaataggggatgaaaccggcaagatccggattaccctg
tgggatggacgtaccgaacttgcagataaactggaaaccggggatagtgtggaaataatc
aatggttatgcccggcttaacaactacagccaggaagtagagatacaggtaggcaaccac
agcagtctgcgcaaaaccgacagagaagtggagtttgaagaagattataccccgattgcc
gacataatccccggccagccctactcaatcaaaggagcagtttccggtatgggagacctc
aaggaatttagccgcagcaatggcagtgaagggaaggtttccaatatatatgtctccgat
gagacgggcaggatcaggattgcactctgggatgaaaaggccgagcttgtggacaaagtc
gatatagatacacctattaagatcatcgatgcttttgctaaatccggtttcaatgaggaa
gtggagctcaatgccggaggacgaagtaaagtgatcgtttcctga

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