Methanohalophilus portucalensis: BKM01_10555
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Entry
BKM01_10555 CDS
T09768
Name
(GenBank) replication factor A
KO
K07466
replication factor A1
Organism
mpot
Methanohalophilus portucalensis
Pathway
mpot03030
DNA replication
mpot03420
Nucleotide excision repair
mpot03430
Mismatch repair
mpot03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mpot00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BKM01_10555
03420 Nucleotide excision repair
BKM01_10555
03430 Mismatch repair
BKM01_10555
03440 Homologous recombination
BKM01_10555
03460 Fanconi anemia pathway
BKM01_10555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mpot03000
]
BKM01_10555
03032 DNA replication proteins [BR:
mpot03032
]
BKM01_10555
03400 DNA repair and recombination proteins [BR:
mpot03400
]
BKM01_10555
Transcription factors [BR:
mpot03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
BKM01_10555
DNA replication proteins [BR:
mpot03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
BKM01_10555
DNA repair and recombination proteins [BR:
mpot03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
BKM01_10555
MMR (mismatch excision repair)
BKM01_10555
DSBR (double strand breaks repair)
HR (homologous recombination)
BKM01_10555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_anti-codon
REPA_OB_2
CDC24_OB3
Ssb-like_OB
OB_MEIOB_N
SHLD2_OB1
DUF3127
SHOCT
Motif
Other DBs
NCBI-ProteinID:
ATU09164
UniProt:
A0A2D3C8T6
LinkDB
All DBs
Position
complement(2070480..2071604)
Genome browser
AA seq
374 aa
AA seq
DB search
MDDIDTVYEKLEGIISREEFEAKVEEKIEEMHNLCDVQTAALLVAHNLGATEAGVETIKI
ADINEASSNVNFTGKAVSVFEPKEFSRDDGTTGRVGNIIVADETGSIRVTLWDDLADLLK
TGDISAGKSYNISGYAKEGYSGIEVNIGRGGGISESEENVKANINLSGISEIKDGDSDVN
VVGMVLDVSDVRTFQKRDGSEGRVRNITIGDETGKIRITLWDGRTELADKLETGDSVEII
NGYARLNNYSQEVEIQVGNHSSLRKTDREVEFEEDYTPIADIIPGQPYSIKGAVSGMGDL
KEFSRSNGSEGKVSNIYVSDETGRIRIALWDEKAELVDKVDIDTPIKIIDAFAKSGFNEE
VELNAGGRSKVIVS
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggacgatatcgatacagtatatgaaaaactggaaggcataatttccagggaagaattt
gaagcaaaggtagaggaaaaaatagaggagatgcataacctctgtgatgtccagacagcc
gccctgctggtagcacataacctcggtgctacggaggcgggcgttgagacgatcaagatt
gcagacataaatgaggcatcatccaacgtgaatttcacaggaaaggccgtttctgttttt
gaaccaaaggaattcagccgtgatgatggcaccacaggcagggttggaaatattatagtg
gcggatgaaacaggttcgatcagggtaaccctctgggatgatcttgcagaccttttgaaa
accggggatatcagtgccggtaagagttacaatatcagtggctacgccaaagaaggttat
tcaggaattgaagtgaatatcggcagagggggaggcatttctgaaagtgaggaaaatgtc
aaagcaaatattaacctctccggtatctcggagataaaggacggggattctgatgtaaat
gtcgttggaatggtgctggatgtatcggatgtgcgtactttccagaaacgtgatggttct
gaaggacgggtacgcaacattacaataggggatgaaaccggcaagatccggattaccctg
tgggatggacgtaccgaacttgcagataaactggaaaccggggatagtgtggaaataatc
aatggttatgcccggcttaacaactacagccaggaagtagagatacaggtaggcaaccac
agcagtctgcgcaaaaccgacagagaagtggagtttgaagaagattataccccgattgcc
gacataatccccggccagccctactcaatcaaaggagcagtttccggtatgggagacctc
aaggaatttagccgcagcaatggcagtgaagggaaggtttccaatatatatgtctccgat
gagacgggcaggatcaggattgcactctgggatgaaaaggccgagcttgtggacaaagtc
gatatagatacacctattaagatcatcgatgcttttgctaaatccggtttcaatgaggaa
gtggagctcaatgccggaggacgaagtaaagtgatcgtttcctga
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