Micromonas pusilla: MICPUCDRAFT_14528
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Entry
MICPUCDRAFT_14528 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_14528
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_14528
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_14528
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
MICPUCDRAFT_14528
Spliceosome [BR:
mpp03041
]
Complex B
Other components
Prp19-related factors
MICPUCDRAFT_14528
Complex C
MICPUCDRAFT_14528
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_15
TPR_12
TPR_8
NRDE-2
ARM_TT21
PPR
Motif
Other DBs
NCBI-GeneID:
9681380
NCBI-ProteinID:
XP_003056470
JGI:
14528
UniProt:
C1MKZ3
LinkDB
All DBs
Position
Unknown
AA seq
838 aa
AA seq
DB search
MGVLSVQVVPGQRCREENDDLVIPQGEDLHYEEELLRSPRESRLWFRYLDAKKGSSARRR
YIIFERSVQALPGSYKLWYAYLTERCNNVRDLCVGSSAHDSLGNTFERALVTMHKMPKIW
ELYLYTLLNQGCVTKMRRSCDRALASLPVTQHDRVWKIYLEFINQDGIPIETAQCVYRRY
IKFEPGHAEEYIGFLQTRAQWVEMTRKLAEVVEDDNFQSLAGKSKHQLWLDLCDVITKHP
CKAVGLDVDAILRGGIQNFCGEVGQLWTSLADFYIRTGLFEKARDVYEEGVATAVTIRDF
SLIFDAYTQFEESVLSAKLESIGREQTVTANSRMIVDLRLARVEHLIGRRPELLSAVMLR
QNPHNTPEWQKRISLFEGDPTKQILTFTEAVKTVDPRLALGKPHVLWINFAKFYELHGDV
DNARIVLEKAACVPFVKIDDLASIWCEWAELELRQKNYHGALTLLRRATSGSVKLVDPHL
AHADSVSAQDGICKSQKLWKFYCDLEESFGSIESSKAAYARMFEARVATPQTVLNFAHLL
LEHKCFDECFRVFERGVHIFKFPHSREIWVEYLKHFVQHFGAKKLERARDLYEQCCDAVP
PKDSKYFFLEYARLEEKHGLGRRAMEIYDRACDKLPVNEKLGMYDVYISRAMELFGVVKV
RSIYETAIAKKLSDQTTKSLCTRYARLECKLGEIARARSLYTHASQFASPQCDTDFWEEW
NRFEVRYGDEDTFREMLRVKRSVSANFVQMHFTMNTSDVTTAVGTSETGVVGVHDGINTL
DVGNVHRAGNSEVHNTVPPSVTDSVTELMKSADERCGHNPTILASHTDNPDEIDLSDG
NT seq
2517 nt
NT seq
+upstream
nt +downstream
nt
atgggcgtcttgtccgttcaagtcgtgccaggacaacgttgtagggaagaaaacgacgat
ctagtaattccgcaaggtgaagacctgcactatgaagaagaacttctacgatctccgcgc
gaatcacgactgtggtttcggtatctagacgccaagaaaggaagcagtgctcgcagacgc
tatatcatattcgagcgctctgttcaagctctgccggggagctacaagctttggtatgcg
tatttgactgaaaggtgtaataatgttcgtgatctctgtgttggaagttcagcgcacgat
tcccttggcaatactttcgagcgcgctttagtcacgatgcacaaaatgcctaagatatgg
gagctttacctctatacactattgaatcaaggatgtgtcacaaaaatgaggcgatcctgc
gatcgagcgctcgcgtcattaccagtgactcagcacgatcgcgtgtggaaaatatatttg
gagtttataaatcaggatggcattccaatcgaaacagcgcaatgcgtctatcgccgatac
attaaatttgagcccgggcacgcagaagaatacatcgggttcctccagactcgagcccag
tgggttgagatgacaagaaaactggctgaagttgttgaggacgataattttcagtccctt
gctggcaaaagtaaacaccagctttggttggatctttgtgatgtcatcaccaagcatcca
tgtaaagcagtggggcttgatgttgacgcaattttgagaggcggaattcaaaatttttgt
ggtgaagtagggcagctctggacttcccttgctgatttctacattcgcactggtcttttt
gagaaagctcgtgatgtgtatgaagaaggagttgcaactgcagtcacgattcgagacttt
tcattgatatttgatgcatacactcaatttgaagagagcgttcttagcgcaaaactggaa
tcaatcggaagagaacaaacagtcactgcaaacagcagaatgatagtggacttgcggctc
gctcgtgtcgagcatctgatcggtcgacgtccagagcttctatccgcggttatgctgcga
caaaatccgcacaatacgccggagtggcagaagcgcatatcactgttcgaaggggaccca
acaaaacagattcttacctttactgaagcggtcaagacagttgatccccggcttgctctt
gggaagccccacgtgctttggatcaacttcgcaaagttttatgagttacacggtgatgtc
gacaatgcccgcattgttcttgagaaggccgcatgtgtcccgttcgtcaagatagacgac
ctcgcttccatctggtgcgaatgggcagagctagaattgaggcagaaaaattaccatggg
gccctcactcttttgcgtcgtgcaacttcaggatcggtgaagttggttgacccacacttg
gcgcacgcggattccgtgtctgcgcaagatggcatctgtaagtcacagaagctctggaag
ttttactgtgatctcgaagagtcttttggttccatcgagtcttctaaggctgcttatgcc
cgcatgtttgaagcacgagttgctaccccgcagactgtcttaaactttgcccacttgctg
ctggaacataaatgttttgacgaatgttttcgtgtttttgagcgtggagtacatattttc
aagtttcctcactcacgtgaaatatgggtggaataccttaaacattttgttcaacatttt
ggtgcgaagaaacttgagcgagctcgagacctctacgagcaatgttgtgacgctgttccg
ccaaaagactctaaatatttttttctcgaatatgctcgcctagaagagaaacacggtctg
ggacgccgtgctatggaaatatatgaccgcgcatgcgacaagttaccagtaaatgaaaaa
ctcggcatgtatgatgtatacatatctcgtgcaatggagttgtttggagttgtgaaggtt
cgctctatttatgaaacggccatcgcaaagaaactttcagaccagactaccaagtctctc
tgtactcgatatgctagattggagtgtaaactcggtgaaatcgcaagagcacgaagtttg
tacactcatgctagccaatttgcaagtcctcaatgtgatactgatttctgggaggagtgg
aaccgtttcgaggttcgatatggggatgaggatacgttcagggagatgttacgagtgaag
cgctctgtcagtgcgaatttcgtccagatgcactttactatgaatacatctgatgttacc
actgctgtaggtacatctgaaacaggggttgtgggagttcatgacggcataaacacactt
gatgttggaaatgttcacagagcaggtaattcagaagttcataatactgttccacctagt
gtgacagattcagtcacggaattaatgaagtctgctgacgagagatgtggtcataatccg
acaatactagcttcacataccgacaacccggatgaaatagatttaagcgacggatga
DBGET
integrated database retrieval system
