KEGG   Micromonas pusilla: MICPUCDRAFT_15891
Entry
MICPUCDRAFT_15891 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12627  U6 snRNA-associated Sm-like protein LSm8
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_15891
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_15891
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_15891
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_15891
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MICPUCDRAFT_15891
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     MICPUCDRAFT_15891
Spliceosome [BR:mpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    MICPUCDRAFT_15891
SSDB
Motif
Pfam: LSM
Other DBs
NCBI-GeneID: 9683095
NCBI-ProteinID: XP_003057947
JGI: 15891
UniProt: C1MPE7
LinkDB
Position
Unknown
AA seq 96 aa
MAKELTELVDTLISVITSDGRNIVGVLRGFDQTTNLILDECFERVYSASSGVEEAPLGLY
IIRGDNIAVIGEIDDEMDANLDYSQIKAPPLKSIAH
NT seq 291 nt   +upstreamnt  +downstreamnt
atggcgaaggagctcacggagctcgtggacacgctcatcagcgtcatcaccagcgacggg
cggaacatcgtcggcgtgctgcgagggttcgatcagacgacgaacctcatcctggacgag
tgcttcgagcgcgtgtacagcgcgagctcgggcgtggaggaggcgccgctcgggctgtac
atcatccgcggcgataacatcgccgtcatcggcgagatagacgacgagatggacgcgaac
ttagactactcgcagattaaagcgccgccgttgaaatcgatcgcgcattag

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