Micromonas pusilla: MICPUCDRAFT_16111
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Entry
MICPUCDRAFT_16111 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_16111
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_16111
03009 Ribosome biogenesis [BR:
mpp03009
]
MICPUCDRAFT_16111
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUCDRAFT_16111
Spliceosome [BR:
mpp03041
]
Complex A
U1 snRNP components
U1 related factors
MICPUCDRAFT_16111
Complex B
MICPUCDRAFT_16111
Ribosome biogenesis [BR:
mpp03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUCDRAFT_16111
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_22
P-loop_SecA
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
9683215
NCBI-ProteinID:
XP_003058144
JGI:
16111
UniProt:
C1MQK9
LinkDB
All DBs
Position
Unknown
AA seq
480 aa
AA seq
DB search
MRGAAKPLSKIKSPGASGGGGGGGGGGSDVSESDDDESRSDADADADADDAAAVPDYFAD
ALKTLGHNRGTTPIQRECWPPCCEGRDVLGIAPPGSGKTLAYLLPAVEFALRDARDFPRA
KRDPRGRPSALVITPTRELAMQVATVCRKLKRAAPVRCVAVYGGASQAEQEEELAQPSSL
ALLVVGTPGRLLATTESGALGLERARLLVLDEADRMLALGFAEQLEKLRGAAAGLGSRPG
RQTLLFSATFPKTVRARSNEATVAVAAGGKAGDGDGGARGVSNVDQTVHVCAEHKKGRKL
LKHITELRKNDGRSRSRVLVFANRIKTVNFVGDMLRRHGEKTGTLHGEMKQEKRELALGD
FKSGKCPVLVATDVAGRGLDITGLEHVVNWDMPGSVEQYAHRVGRAGRAGRRGAALTFFT
RNMAPTAPDLVKLLRKGGHFVDPNLEALAKAGKGGKGGKGGGRGGGRGGGRGRGGRGKRW
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggcgccgcgaagccgctgtcgaagatcaagagcccgggcgcgagcggcggcggc
ggcggcggaggcggcggcggctcggacgtctccgagtccgacgacgacgaatcgcgatcc
gacgccgacgccgacgccgacgccgacgacgccgcggcggtgccggactacttcgccgac
gcgctcaaaacgctcggacacaaccgaggcacgacgccgatccagcgcgagtgctggccg
ccgtgctgcgaggggagagacgtccttgggatcgcgccgccgggctcgggaaagacgctg
gcgtacttactccccgccgtcgagttcgcgttgcgcgacgcgcgcgatttcccccgcgcg
aagagagacccgcgcgggcgaccgtccgcgctcgtgatcacgccgacgcgcgagctcgcg
atgcaagtcgcgacggtgtgtcggaaactgaaacgcgcggcgccggtgcgttgcgtcgcc
gtctacggcggcgcgagccaggcggagcaagaggaggagctcgcgcagccgtcgtcgttg
gcgttgctcgtcgtggggaccccggggaggttgctcgcgacgacggagagcggcgcgctg
gggttggagcgcgcgcgtttgctcgtgctggacgaggcggaccgcatgctcgcgctgggg
ttcgcggagcagctcgagaagctccgcggagccgccgccgggctcgggtcgaggccggga
cggcagacgctgctgttcagcgcgacgttcccgaagaccgtgcgcgcgcgatcgaacgag
gcgaccgtcgcggtcgccgcggggggcaaagccggcgacggcgacggcggcgcgcgcggt
gtctccaacgtggaccagaccgtgcacgtgtgcgcggagcacaagaagggcaggaagctc
ctgaagcacatcacggagctgcggaagaacgacgggcggagccggtcgcgcgtcttggtg
ttcgcgaaccgaatcaagacggtgaacttcgtcggggacatgctcagacgccacggcgag
aaaaccggcacgctccacggggagatgaagcaagagaagcgcgagctcgcgctcggggac
ttcaagagcgggaagtgccccgtgctcgtcgcgacggacgtcgccgggcgaggcctggac
atcaccggtctggaacacgtcgtgaactgggacatgcccggcagcgtggagcagtacgcg
cacagagtcggcagggcggggcgggcggggcgtcgcggcgcggcgttgactttcttcacg
cggaacatggcgccgacggcgccggacctcgtgaagttgctgaggaaaggggggcacttc
gtggatccaaacttggaggcgctggcgaaggcggggaaaggcgggaaaggcgggaaaggc
ggcgggaggggcggcgggaggggcggcggacgcgggcgcggaggacgagggaaacgttgg
tga
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