KEGG   Micromonas pusilla: MICPUCDRAFT_16347
Entry
MICPUCDRAFT_16347 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K07573  exosome complex component CSL4
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_16347
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_16347
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     MICPUCDRAFT_16347
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Core exosome
     MICPUCDRAFT_16347
SSDB
Motif
Pfam: ECR1_N EXOSC1
Other DBs
NCBI-GeneID: 9683680
NCBI-ProteinID: XP_003058242
JGI: 16347
UniProt: C1MR50
LinkDB
Position
Unknown
AA seq 196 aa
MTATASVCPGERLRFAEEFLPGPGTYVRDKHVLAAVVGDARVVPAADDAEDRRPTIEVVR
RGTARVGGLLLPQIGDEVFAKVTRTNPKLANVEIVCVNGLACADPFNGIVRVSEIRASET
AELDLHDCFVPGDIIRGRIISLGDARSYYVSTAENELGVVRARSPFTGEPMIPAQWDEME
CPSTRKRVKRKVAKVI
NT seq 591 nt   +upstreamnt  +downstreamnt
atgacggcgaccgcgtccgtgtgccccggcgagcgcctgcggttcgcggaggagttcctc
cccggccccgggacgtacgtccgcgataagcacgtcctcgccgcggtcgtcggcgacgcg
cgcgtcgtcccggcggcggacgacgccgaggatcgccgcccgacgatcgaggtcgtcaga
agaggcaccgcccgcgtcggcgggctgctgctgccgcagatcggagacgaggtgttcgcg
aaggtcacgcgcacgaacccgaagctcgcgaacgtggagatcgtgtgcgtgaacgggctg
gcgtgcgcggatccgttcaacgggatcgtgcgagtctcagagattcgcgcgagcgagacc
gcggagctggacctgcacgactgcttcgtcccgggagacatcatccgcggacggatcata
tcgttgggggacgcgcggtcgtactacgtcagcaccgcggagaacgagctaggggtggtc
agggcgcggtcgccgttcacgggcgagccgatgatcccggcgcagtgggacgagatggag
tgcccgagcacgaggaagcgggtgaagaggaaggtggcgaaggtgatatga

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