Micromonas pusilla: MICPUCDRAFT_16347
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Entry
MICPUCDRAFT_16347 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K07573
exosome complex component CSL4
Organism
mpp
Micromonas pusilla
Pathway
mpp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MICPUCDRAFT_16347
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_16347
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
MICPUCDRAFT_16347
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
MICPUCDRAFT_16347
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
Motif
Other DBs
NCBI-GeneID:
9683680
NCBI-ProteinID:
XP_003058242
JGI:
16347
UniProt:
C1MR50
LinkDB
All DBs
Position
Unknown
AA seq
196 aa
AA seq
DB search
MTATASVCPGERLRFAEEFLPGPGTYVRDKHVLAAVVGDARVVPAADDAEDRRPTIEVVR
RGTARVGGLLLPQIGDEVFAKVTRTNPKLANVEIVCVNGLACADPFNGIVRVSEIRASET
AELDLHDCFVPGDIIRGRIISLGDARSYYVSTAENELGVVRARSPFTGEPMIPAQWDEME
CPSTRKRVKRKVAKVI
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgacggcgaccgcgtccgtgtgccccggcgagcgcctgcggttcgcggaggagttcctc
cccggccccgggacgtacgtccgcgataagcacgtcctcgccgcggtcgtcggcgacgcg
cgcgtcgtcccggcggcggacgacgccgaggatcgccgcccgacgatcgaggtcgtcaga
agaggcaccgcccgcgtcggcgggctgctgctgccgcagatcggagacgaggtgttcgcg
aaggtcacgcgcacgaacccgaagctcgcgaacgtggagatcgtgtgcgtgaacgggctg
gcgtgcgcggatccgttcaacgggatcgtgcgagtctcagagattcgcgcgagcgagacc
gcggagctggacctgcacgactgcttcgtcccgggagacatcatccgcggacggatcata
tcgttgggggacgcgcggtcgtactacgtcagcaccgcggagaacgagctaggggtggtc
agggcgcggtcgccgttcacgggcgagccgatgatcccggcgcagtgggacgagatggag
tgcccgagcacgaggaagcgggtgaagaggaaggtggcgaaggtgatatga
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integrated database retrieval system