Micromonas pusilla: MICPUCDRAFT_18446
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Entry
MICPUCDRAFT_18446 CDS
T02696
Symbol
JGI:MicpuC2_18446
Name
(RefSeq) uncharacterized protein
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mpp03009
]
MICPUCDRAFT_18446 (JGI:MicpuC2_18446)
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUCDRAFT_18446 (JGI:MicpuC2_18446)
Ribosome biogenesis [BR:
mpp03009
]
Eukaryotic type
Pre-60S particles
Helicases
MICPUCDRAFT_18446 (JGI:MicpuC2_18446)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DUF4217
ResIII
AAA_19
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
9685492
NCBI-ProteinID:
XP_003059768
JGI:
18446
UniProt:
C1MVK5
LinkDB
All DBs
Position
Unknown
AA seq
535 aa
AA seq
DB search
MGEEETAPGPTRRDAEGPRFSALRPSLRPESLEVLRSRGFERATPVQAAAIGLLAGNKDV
AVEACTGSGKTLAFVLPLVEILSRAESRFRPHQVGAVVVSPTRELAKQIFDVAAPFLRTI
PRTSPPMLLVGGTDPARDVRGFDDDGACCLVGTPGRLDDVMIRAKTMDLKRVELLVLDEA
DRLLSMGFQKTLSAIIGRLPKQRRTGLFSATQTEEVEELARAGLRNPVRVTVRCAAANAA
AAAGAPPSSAAARGKLPSQLKLTYETCHYDERLWRLKTFLSEKLRADAKVIVYFLTCACV
DYYHTALSAGGPADPLAGDDDDGVRPAAGATDAVVALHGKMKQAQREAALSAFAATTTGA
CLLCTDVAARGLDIPGVDWVIQFDAPQDPAAFVHRVGRTARMGREGSSLLYVSPHEESYL
EFLRVRHIKSPESAEGGRAVCAALRAHSEKNREAMEKGVRAFVSYARGYKEHHCRFIFRF
KELPLARLARAMGLLRLPRMKEIRKASKASLAGFEESSVDPDGVPFADKARERQR
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atgggcgaagaggagacggccccgggcccaacgcggcgcgacgcggagggcccgcggttc
tccgcgctgcgtccgtcgctgcgcccagagtcgctcgaggtgctccgctcgcggggcttc
gagcgcgcgacgccggtgcaggccgcggcgatcggcctcctcgcggggaacaaggacgtc
gccgtggaggcgtgcaccgggagcgggaagacgctcgcgttcgtgctcccgctcgtggag
atcctgtcgcgcgcggagtcgcggttcaggccgcatcaagtgggcgccgtcgtcgtctcc
ccgacgcgcgagctcgcgaagcagatcttcgacgtcgccgcgcccttcttgcgcacgatc
ccgaggacgtcgccgccgatgctcctcgtcggcggcacggacccagcgcgcgacgtccga
ggattcgacgacgacggcgcgtgctgcctcgtcggcacgccggggcggctcgacgacgtc
atgattcgcgccaagacgatggacctcaagcgcgtcgagcttctcgtgttggacgaagcg
gatcggctgctgtcgatggggtttcagaagaccctgagcgcgatcatcgggaggctgccg
aagcagcggaggacggggctgttcagcgcgacgcagacggaggaggtggaggagctcgcg
cgcgcgggactgcgcaacccggtgcgggtgacggtcaggtgcgcggcggcgaacgcggcg
gccgccgcgggcgcgccgccgtcctccgcggccgcgcgagggaagctcccgtcgcagctg
aagctgacgtacgagacatgtcactacgacgagaggctgtggcggctgaagacgttcctg
agcgagaagttgcgcgcagacgcgaaggtcatcgtgtactttctcacgtgcgcgtgcgtg
gattactaccacaccgcgctgagcgcgggcgggcccgcggatccgttggccggcgacgat
gacgatggagtgaggcccgccgcaggcgcgaccgacgccgtcgtcgcgctgcacgggaag
atgaaacaagcgcagcgcgaagccgcgctctccgcgttcgcggcgacgacgacgggcgcg
tgtttgctgtgcaccgacgtcgccgcgcggggtctggacatcccgggcgtggactgggtg
attcagttcgacgcgccgcaggacccggcggcgttcgtgcatcgcgtcgggaggaccgcg
cggatgggacgggaagggagctcgttgctgtacgtgtcgccgcacgaggagagttacctc
gagtttctcagggtgcggcacattaagtcccccgagtccgcggagggcggccgcgccgtc
tgcgccgcgctccgcgcgcactcggagaagaaccgagaggcgatggagaagggcgtgcgc
gccttcgtgtcctacgcgcgcggatacaaagagcaccactgccggttcatcttccgcttc
aaagagctcccgctcgcgaggctcgcgcgcgcgatgggcctgctgcggctgccgcgcatg
aaagagatccgcaaggcgtcgaaggcgtccctggccgggttcgaggagtcgagcgtagac
ccggacggcgtcccgttcgcggataaggcgcgggaacgacaacgc
DBGET
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