Micromonas pusilla: MICPUCDRAFT_197 Help Entry MICPUCDRAFT_197   CDS       T02696                                  Name (RefSeq) uncharacterized protein   KO K14442   ATP-dependent RNA helicase DHX36 [EC:5.6.2.6] Organism mpp  Micromonas pusilla Pathway mpp03018   RNA degradation Brite KEGG Orthology (KO) [BR:mpp00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     MICPUCDRAFT_197  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:mpp03019]     MICPUCDRAFT_197    03012 Translation factors [BR:mpp03012]     MICPUCDRAFT_197 Enzymes [BR:mpp01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.6  RNA 3'-5' helicase      MICPUCDRAFT_197 Messenger RNA biogenesis [BR:mpp03019]  Eukaryotic type   mRNA degradation factors    3'-5' decay     Other 3'-5' decay factors      MICPUCDRAFT_197 Translation factors [BR:mpp03012]  Eukaryotic type   Initiation factors    Initiation associated factors     MICPUCDRAFT_197 BRITE hierarchy SSDB OrthologParalogGFIT Motif Pfam:  R3H HA2_C Helicase_C OB_NTP_bind DEAD HA2_N AAA_19 Ank_2 Ank nSTAND3 ATPase Rad17 AAA_22 AAA_16 Motif Other DBs NCBI-GeneID:  9686386 NCBI-ProteinID:  XP_003060947 JGI:  197 UniProt:  C1MZF6 LinkDB All DBs Position Unknown AA seq 1111 aa AA seqDB search EGTRINIDQQLARFKASDEVEIAFPPDLNNHDRAVVHSEAKKLGLKSKSHGKGDERRVHV TKPKEFKPEDHEVRGRARTRTRELEIAASGSLDAAWDDEDRGAAGASGGHGGKRAKTAPP LLMRPHGAVTPEMATACAAALATRVATDRDLAEIQRKRAALPVDAFKAEILSACASHQVV LIAGATGCGKTTQVPQYLIDDAWQRGVGAAIMCTQPRRISAITVAERVAAERGEQIGKGS VGYQIRLENKACADTALLFCTNGVLLRRLTSPGADKMLASLSHIVIDELHERDLFADFLT IVLRSAMARHPHLRLVLMSATVRESLFSEYFGGCPVIRVPGYTHPVADYHLEDILDRVGY GGASGGGLTRTATADPDSPEGKAMQAAVMHAFLEGSDDAFDALMCTIRGVGGGGVTVGET ALVGVAHEQTGATALMAAAGKGRHVEVGQLLGCGADPTQRSRDGSSSADWARRFGHDDIA ATLDQAQAELERLAHFQDSAIALSRYQLDADPDEVDLQLAQELIHWIVRRRAADVAAEQG GGGPDGAILVFLPGWFEISQLRDNLAADSRFGRDVLVLPLHSMVPPAEQKKVFQRPPRGV KKVVLATNIAETAVTIDDVVFVIDSGRLKEKSYDAHTGVSTLQSAWISRASAQQRRGRAG RVRPGECYRLYSSARLAAFADFQLPEMQRSPLEELCLQVRMLAEASSLGGELGGGAAAVG AGAGSTANFLLQAVEPPIPQAIAHAVTLLQDIGALKEDEGLTRLGRHLGEMPVHPRVGKM LLYATLLGVLDPVLTVACAAAYRSPFVMAMDGNREAGKLARQGFSNEAGGASDHLAVSRA FAGWETSRANGGSSGERAFNQRNSLSGATLNMLRGMRSQLLTALSGRGLIHDLRGASANA GAGSLVRAVLAVGMYPLVGRLLVPGVGANNAGGGRTPTLATLRGEKVKIHPHSVNAKLHD AARSSGVADKGPTLVCFDDVTRGEAQLYVRECTAVSAASLVLVASSLTVEALPPARLPPH DPEDAAAAAEAMMERDLAQAAQDAANEAVLVCDDWLKFRVPLPVLSQLACLRIRLARAFA AKVQRPADALAPDLAEALRATATLLAHDGGA NT seq 3333 nt NT seq  +upstreamnt  +downstreamnt gagggcacgcgcatcaacatcgaccagcagctcgcgcggttcaaggcgtcggacgaggtc gagatcgcgtttccgcccgatctgaacaaccacgaccgcgcggtcgtgcactccgaggcc aagaagctcgggctgaagtcgaagtcgcacgggaaaggcgacgagcgccgcgtgcacgtc acgaagccgaaagagttcaagccggaggaccacgaggtgcggggccgcgcgcgaacgcga acgcgagagctcgagatcgccgcgagcggatccctggacgcggcgtgggacgacgaagac cgcggcgcagcgggcgcgagcggcggccacggcggcaaacgcgccaagaccgcgccgccg ctgctcatgcgcccgcacggcgcggtgacgccggagatggcgacggcgtgcgcggcggcg ctcgcgacgcgcgtcgcgacggaccgcgatttggcggagattcagaggaagcgcgcggcg ttgccggtggacgcgttcaaggctgagattttgtccgcgtgcgcgtcccatcaagtcgtg ctcatcgccggcgcgacggggtgcgggaagacgacgcaggtgccgcagtatctcatcgac gacgcgtggcagcgcggcgtcggcgcggcgatcatgtgcacgcagccgagacgcatatcc gcgatcacggtggcggaacgcgtcgccgcggagcgcggggaacagatcgggaaagggtcc gtggggtaccaaatccgtctggagaacaaggcgtgcgcggacaccgcgctgttgttctgc acgaacggcgtgttactccgacggctgacgtcgcccggggcggataagatgctcgcttcg ctgtcgcacatcgtcatcgacgagctgcacgagcgcgatttattcgcggactttctcacg atcgttttgcgatccgcgatggcgcggcacccgcaccttcgcctggttttaatgtccgcg acggtcagggagagcttattcagcgagtacttcggcgggtgcccggtaattcgcgtcccc gggtacacgcatccggtcgcggactaccacctcgaggacatcttagaccgcgtcgggtac ggcggcgcgagcggcggcgggctgacgcgaacggccaccgcggacccggactcccccgag ggcaaagcgatgcaagccgcggtgatgcacgcgtttctcgaaggcagcgacgacgcgttc gacgcgctcatgtgcacgatacgaggcgtcggcggcggcggcgtcaccgtcggcgagacc gcgctcgtgggcgtcgcgcacgagcagacgggcgcgacggcgttgatggcggcggcgggg aaagggaggcacgtcgaagtcgggcaactgctcggctgcggcgcggacccgacgcagcgg tcgcgcgacggaagcagctccgcggactgggcgcggcggttcggacacgacgacatcgcg gcgacgctggaccaagcgcaggcggagctcgaacgcctcgcgcattttcaagactccgcc atcgcgctgtcgcggtatcagctcgacgcggacccggacgaggtggacttacagctcgcg caggagttgatccactggatcgtgcggcgcagagccgcggacgtcgccgcggagcaaggc ggcggcggccccgatggcgcgatcctcgtcttcctccccgggtggttcgagatctcgcag ctgcgggataacctcgcggcggattcgcggttcggacgagacgtcctcgtgctccccctg cacagcatggtgccgcccgcggagcagaagaaggtgtttcagcgtccgccgcgtggcgtg aagaaggttgtcctcgcgacgaacatcgcggagacggcggtgacgatcgacgacgtcgtc ttcgtgattgactctgggaggttgaaagagaagagctacgacgcgcacacgggcgtgagc acgttgcagtccgcgtggatctcccgagcgagcgcgcaacaacgacgcggccgcgccggt cgcgtgcgaccgggggagtgctacaggctgtactcctccgcgcggctcgccgcgttcgcg gacttccagctcccggagatgcagcgctcgccgctggaggagctttgtctgcaagtgcga atgctcgcggaggcgtcgagcctcggcggcgagctcggcggcggcgccgccgcggtcggc gccggcgccgggtccaccgcgaactttttactgcaagccgtggagccgccgattccgcag gcaatcgcgcacgcggtgacgcttctccaggacatcggcgcgttgaaagaggacgagggg ctgacgcgtttggggcgccacctcggagagatgcccgtgcacccgcgcgtgggtaagatg ctcctgtacgcgacgttattgggggtgttggatcccgtgctcaccgtcgcgtgcgcggcg gcgtatcggtcgcccttcgtgatggcgatggacggaaacagagaagccgggaaactcgcg cggcaggggttctcgaacgaagccggcggcgcgtcggaccacctcgcggtctcgcgcgcg ttcgcgggatgggagacgtcgcgcgcgaatggcgggagctccggggagagagcgttcaac cagcgcaattccttgagcggcgcgacgttgaacatgctcagagggatgcgatctcagctg ctcaccgcgctgagcggacgcgggttgattcacgacttgcgcggcgcgagcgcgaacgcg ggcgcggggtcgctcgtccgcgcggtcctcgccgtggggatgtacccgctcgtcgggcgc ctgctcgtccccggcgtcggcgcgaacaacgccggcggggggcgaacgccgacgctcgcg acgttgcgaggcgaaaaggtgaagattcacccgcacagcgtcaacgcgaagcttcacgac gccgcgcgctcgagcggcgtcgcggataaaggcccgacgctcgtgtgcttcgacgacgtc acgcgaggcgaagcgcagttatacgtgcgagagtgcacggcggtcagcgcggcgtcgctc gtgctcgtcgcgagctcgctcaccgtggaggcgttgccgccggcgcggcttccgccgcac gatccggaggacgcggcggcggcggcggaggcgatgatggagagagacctcgcgcaggcg gcgcaggacgccgcgaacgaggccgtgctcgtgtgcgacgactggctcaagttccgcgtt ccgcttccggtgctgtcccagctcgcgtgtttgaggatacgcctcgcgcgcgcgttcgcg gcgaaagtgcagcgaccggcggatgcgctcgcgccggatttggccgaggcgttgagagcg accgcgacgttgctcgcgcacgacggcggcgcc

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