Micromonas pusilla: MICPUCDRAFT_24785
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Entry
MICPUCDRAFT_24785 CDS
T02696
Symbol
JGI:MicpuC2_24785
Name
(RefSeq) uncharacterized protein
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
03009 Ribosome biogenesis [BR:
mpp03009
]
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
Spliceosome [BR:
mpp03041
]
Complex A
U2 snRNP components
U2 related factors
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
Complex B
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
Ribosome biogenesis [BR:
mpp03009
]
Eukaryotic type
90S particles
Helicases
MICPUCDRAFT_24785 (JGI:MicpuC2_24785)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
DEAD
HA2_N
AAA_22
AAA_19
nSTAND3
AAA_30
T2SSE
SRP54
PhoH
ABC_tran
TsaE
NACHT
Motif
Other DBs
NCBI-GeneID:
9681329
NCBI-ProteinID:
XP_003056367
JGI:
24785
UniProt:
C1MKD7
LinkDB
All DBs
Position
Unknown
AA seq
700 aa
AA seq
DB search
MEAHIAVSRNQHFPVQLSDPTDSVERAHRAGDALQVNPFTHRPYSEKYFDILKKRKDLPV
WQQQKDFVNILKKSQTLILVGETGSGKTTQVPQFVVDAGYTVNGKLCVCTQPRRVAAMSV
ARRVAEEMDVSIGHEVGYSIRFEEVTGPKTLLKYSTDGMLLREAMTDPLLRRYSVIIIDE
AHERTLATDILFGLLKEVLLKRRDLKVVVMSATLEAQKFQGYFLDAPLMQVPGRLHPVEI
FYTENPERDYLEATIRTAVQIHACEPPGDILVFLTGEEEIEDACMKIKREVSNMGDRVGD
IMVVPLYASLPPQQQQRVFDVAPSSRNTRTSRKIVISTNIAETSLTIDGVVYVIDPGFAK
QKVYNPRIRVESLLVSPISRASAHQRAGRAGRTCPGKCFRLYTETSFKRDLQEQTYPEIL
RSNLGSVVLQLKKLGIDDLPYGKDPPAPETLMRALELLNYLDALDDEGNLSQVGFVMSEF
PLDPQLSKMLCASPQFNCSNEILSIVSMLSVPNPFVRPRDQQFEADEARSQFCHIDGDHL
TLLNAYHAFKQNGGDTGWCHKNYLNMRSLKSADNVRTQLVRLVSRHNIAVVSSDFTSKDY
YLNIRKAVLSGYFMQVAHLERSGHYLTVKDNQLVSLHPSTCLQQKPEWVLYNEFVLTTKN
YIRVCTEIKGNWLLDIASHYYDLSNFPECEARRVLERLCS
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggaggcgcatattgctgtcagtagaaatcaacactttccagtgcaattaagcgaccct
actgactcagttgagcgcgctcatcgagccggcgatgcactgcaagtcaacccattcacg
cacaggccgtactccgaaaagtacttcgacattctaaaaaaacgaaaggatcttcctgtg
tggcagcaacagaaagatttcgtaaacatactcaaaaaaagtcagactctcattcttgtg
ggagaaacaggttccggaaagacaacacaagttccccagtttgttgttgatgcaggctac
actgtgaatggtaagctctgtgtctgtacacagcctcgccgagtcgcggcaatgtcagtt
gctcgtcgtgttgccgaagagatggatgtcagcatcgggcatgaagttgggtattctatt
cgatttgaagaggtcacagggccaaaaactttacttaaatactctaccgatggaatgctc
cttcgcgaggcgatgacggaccctttactccgtcgttacagtgttatcataattgacgag
gcccacgagcgaacactcgctacagacatactttttggacttctcaaggaagtccttctc
aaacgaagggatctgaaagtcgtggttatgtctgctacacttgaagctcaaaaatttcaa
ggatacttcttggatgcacctttgatgcaggtgccgggaagactacacccagtagagatt
ttttacaccgagaatcctgagcgtgactacttagaggctacaatccgcacggcagttcag
attcatgcatgtgagcctcctggagacattcttgtatttcttacaggagaggaagagata
gaggatgcctgcatgaaaattaaacgcgaggtttcaaacatgggggacagagttggtgac
atcatggtcgtcccgttatatgccagtcttccccctcagcaacagcaacgtgtgtttgat
gttgcaccatcatcgcgtaatacacgaacaagccgcaaaatagttatatcaaccaatatc
gcggagacctccctcactatcgatggagttgtatatgtgattgaccctgggtttgccaag
caaaaggtttacaatccacgcattcgggtggagtctcttcttgtgtcgccaatcagtaga
gcatcagcacatcagcgagcaggccgcgccggacggacgtgcccgggaaagtgtttccgc
ctatatacagagacttccttcaaacgtgacttacaggagcaaacataccccgagatactg
cgttcgaatcttggctccgtggttttgcaactaaagaagcttgggattgatgacttgccc
tatggcaaggacccccccgccccagaaactttaatgagggcactagaacttctgaactat
cttgacgcacttgatgacgaaggaaatctttcacaggtgggatttgtaatgagcgagttt
cctctggatccgcagctttcaaaaatgttgtgtgcatcacctcaattcaactgtagcaac
gagatactgtctatcgtttcgatgctatctgtgccgaatccgtttgttcgtcctcgggac
cagcagttcgaggccgacgaagctaggtctcaattttgccacatagatggcgatcatctc
actttgcttaatgcgtaccatgcttttaaacagaatggcggagatacaggatggtgtcac
aagaattatcttaacatgcgttcattgaaatcagctgataatgtccgaactcaacttgtc
cgccttgtctctcgccacaatatagcggtggtatcctcagacttcactagcaaagattat
taccttaacattcgaaaagcagttttgtcaggatatttcatgcaagtagcacacctcgag
cgaagcgggcattaccttactgtgaaagataatcagttggtttcattacacccttcaact
tgtttacagcaaaaaccagagtgggtgctctacaatgaatttgtgctaacgacgaaaaat
tacatccgagtttgcactgagattaagggaaactggcttttagatatcgcttctcattac
tacgacttatccaatttcccagagtgcgaggcccgacgggttctggagcgcctgtgctct
tga
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