KEGG   Micromonas pusilla: MICPUCDRAFT_24904
Entry
MICPUCDRAFT_24904 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mpp  Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_24904
Spliceosome [BR:mpp03041]
 Complex B
  Other components
   Complex B specific factors
    MICPUCDRAFT_24904
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 WD40_CDC20-Fz WDR55 ANAPC4_WD40 EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML LisH_TPL WD40_MABP1-WDR62_2nd Beta-prop_WDR75_1st Beta-prop_RIG_2nd Beta-prop_TEP1_C Beta-prop_DCAF4 WD40_RFWD3 Ge1_WD40 WDR90_beta-prop_4th NBCH_WD40 Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_NWD2_C Beta-prop_VPS8 Beta-prop_WDR35_TULP_N Beta-prop_SPT8 Beta-prop_Nup120_160 Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Beta-prop_IFT122_1st Beta-prop_SCAP WD40_like Beta-prop_WDR19_1st Beta-prop_EIPR1 VPS8_N Beta-prop_KIB1-4 Beta-prop_IFT122_2nd PROPPIN
Other DBs
NCBI-GeneID: 9681967
NCBI-ProteinID: XP_003056418
JGI: 24904
UniProt: C1MKN3
LinkDB
Position
Unknown
AA seq 513 aa
MSQKLEVDSSDIVKVILQFCRENELTQSYYAIQDECQVALNTIFSGEILTDNIMHGRWDE
VLLQVSQLHLPQQVLQDLVEQIVLEMIHLKEFDTVFLLMQTKVMNIMRQEQPSRFAKLER
LVKCSTRSNIDNHHFDLPKKIPRASLAKTLLREITVAPPSQMLTLIGQALKWQREKNKLS
PDHFFDLFRSANAAIVDAVEACPASEHCTINFGLKTCPQCACFSSDGQLLATGSVDGLVE
LWNWFSGKLERNLHYQEAELFFMHSSSVLALDFSRNSDLLVSASLDGEVKVWQVNTGQCI
RKFEKAHPQGICSVVFNYDSSQLLSVSTDGAVRIHGIKSGKMLKELSSERTVKDAKYTTN
GFQIITGTLDGIVQVWDSKSMEIIEELYPPVLDSSGRRAAIKCIIPLNNSPGQFVVCTTK
NTVHVMTSRGQVAQSFSCKLGKGDFVSCVVSPKCDWIYILREDGNVIFFSVKSSEVEKLL
LAHDELPLGICHHPHRAVLATFSMSGTLRLWVP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtctcagaaactggaggtcgactcttcggacatcgtaaaagttattctccagttctgc
agagaaaacgaactcacgcagtcttactacgctattcaagacgaatgtcaggttgctctg
aacacaatattcagtggagaaatactcactgacaacataatgcatgggcgttgggatgag
gttcttttgcaggtttctcaacttcatttgccccaacaggtgcttcaggacttagtcgaa
caaattgtactggaaatgattcatctcaaggagtttgacacagtctttttacttatgcaa
accaaggtgatgaatatcatgcgtcaggagcaaccttctcgctttgcgaaacttgagcgg
ttggtgaagtgcagtactcgatcgaacatagataatcatcattttgatttgccgaaaaag
ataccccgagcgtccttggcaaaaacactactacgggagattacagttgcgcccccttct
caaatgttaacgctgataggacaggcactcaagtggcaaagggagaaaaataaattatcg
cctgatcactttttcgatctctttcgcagcgcaaatgcagccatagtggatgcagttgag
gcttgtccagcttccgagcactgcaccataaatttcggattgaaaacttgtcctcagtgt
gcatgtttctcctcagatggtcaactgcttgccacgggttcagtggatggcctcgtagaa
ctatggaactggttctcagggaaacttgagcgaaaccttcactaccaagaggcggagtta
ttttttatgcacagttcttctgttcttgcactcgacttttcaaggaacagtgacttgttg
gtatcagcctctctggacggagaagtgaaggtttggcaagtcaatacgggacaatgtatt
cgtaagtttgaaaaggcacaccctcaagggatttgctctgtggtattcaactatgacagt
agtcagcttttgagcgtctcaactgatggtgctgttcgcatacatggaataaagtctgga
aaaatgttgaaggagttgtccagtgaacgcactgtgaaagatgcgaagtacactaccaat
gggtttcagatcataacaggcacactagatgggatagttcaagtctgggattccaagagc
atggaaatcattgaggagttgtatccacctgttttggactcgtcaggaagaagggcagct
ataaaatgtattattccactcaacaactctcctggtcaattcgtggtgtgtactacgaag
aacactgtgcatgttatgacttcgcgtgggcaagtcgctcagtcatttagttgcaaactt
ggaaaaggagacttcgtgtcgtgtgtcgtgtcgccgaaatgcgactggatttacatcctt
agggaagatggaaacgtgatttttttttcagtgaaaagcagtgaagttgagaaactgctc
ctggctcacgatgagcttcccctgggcatttgtcaccatcctcaccgtgctgtattggcg
actttctccatgtcgggtaccctgaggttatgggttccatga

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