KEGG   Micromonas pusilla: MICPUCDRAFT_2506
Entry
MICPUCDRAFT_2506  CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12662  U4/U6 small nuclear ribonucleoprotein PRP4
Organism
mpp  Micromonas pusilla
Pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_2506
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_2506
Spliceosome [BR:mpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6 snRNP specific factors
    MICPUCDRAFT_2506
SSDB
Motif
Pfam: WD40_Prp19 WD40 WD40_WDHD1_1st EIF3I WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_EML PRP4 Beta-prop_WDR75_1st Beta-prop_IFT122_1st Beta-prop_SCAP WD40_MABP1-WDR62_1st NBCH_WD40 ANAPC4_WD40 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_RIG_2nd WDR90_beta-prop_4th Beta-prop_Nup120_160 Beta-prop_Vps41 WD_LRWD1
Other DBs
NCBI-GeneID: 9689349
NCBI-ProteinID: XP_003063908
JGI: 2506
UniProt: C1N7I6
LinkDB
Position
Unknown
AA seq 490 aa
DAMAEGVAKGNVHLANLAEAGERFALSAGSEETRTRQEALLREFENRRRQRAVAVTTDDR
EVRKQLRELGEPMTLFAEGPGERRDRLRAHLAALDAADGGALPVPDEATVVETEDVQREL
FYTEGSANLMRARTLIASYSLPRASARVSLAKRRRADAAVDEIGEMDADAAATRTFKTEC
SQIGDERPLSVVRFSPGDGGACVMSASWSGGVRLWRTDGCERLLTVKAHENRITGADFHP
TNATLRAVTSEEGEGGGGAGEGPGPCAMATACADGSAHLWSAKGALLKTLKGHANRLARC
AFHPAGEHLATAGFDKTWRLWSVETGEELLCQEGHSRAVYDVAFHPDGSLCASVGLESHG
KVWDLRTGKCVHNLVGHNKQCLSVDFSPNGYHVATGSDDHTAKIWDLRKRACLYTVPAHS
SLISSVKYEPTRGGYFVTGSYDGVAKAWSARDFSRINSLRGHEAKVMCVDVAPGGETCAT
VSYDRTLKLW
NT seq 1470 nt   +upstreamnt  +downstreamnt
gacgcgatggcggagggcgtcgcgaagggcaacgtccacctcgcgaatctcgccgaggcg
ggcgagcgattcgcgctctccgcggggagcgaggagacgcgcacgcgccaagaagcgctc
ctccgcgagttcgaaaaccgccgacgccagcgcgcggtcgcggtgacgacggacgaccga
gaggtgcggaagcagctccgagagctcggcgagcccatgacgctcttcgcggagggaccc
ggcgagcggcgcgatcgcctgcgcgcgcacctcgcggcgttagacgccgcggacggcggc
gcgctcccggtcccggacgaggcgaccgtcgtcgagaccgaggacgtccagcgcgagctg
ttctacaccgaggggagcgcgaacttgatgcgcgcgaggacgctcatcgcgtcctattct
cttccccgcgcgtccgcgcgcgtctcgctcgccaagcgtcgccgcgccgacgccgccgtc
gacgagatcggcgagatggacgcggacgcggccgcgacgcggacgttcaagacggagtgc
tcgcagatcggcgacgagcggccgctgagcgtcgtgcggttctccccgggggacggcggc
gcgtgcgtgatgagcgcgtcgtggagcggcggcgtcaggctgtggaggacggacggatgc
gagcgactgctgacggtcaaggcgcacgagaacaggatcacgggcgcggactttcacccg
acgaacgcgacgttgcgcgcggtgacgtcggaggagggagagggcggcggcggcgcgggg
gagggaccggggccgtgcgcgatggcgacggcgtgcgcggacggctcggcgcatctctgg
agcgcgaagggcgcgctcttgaagacgttgaaaggccacgcgaatcgactcgcgcggtgc
gcgttccaccccgccggagagcacctcgcgaccgcggggttcgacaagacgtggaggctg
tggagcgtcgagaccggggaggagctcctgtgccaggaggggcactcgcgcgcggtgtac
gacgtcgcgtttcacccggacgggtccctctgcgcctccgtcgggctggagtcgcacggg
aaggtgtgggaccttcgcaccgggaagtgcgtgcacaacctcgtcgggcacaacaagcag
tgcctcagcgtggacttctccccgaacgggtaccacgtcgcgacgggcagcgacgaccac
acggcgaagatttgggacttgcggaagcgcgcgtgtctgtacaccgtgcccgcgcacagt
tcgctcatctcctcggtgaagtacgagccgacgcggggagggtacttcgtcaccgggtcg
tacgacggcgtcgcgaaggcgtggagcgcgcgcgatttctcgaggatcaactccctcaga
gggcacgaggcgaaggtgatgtgcgtggacgtcgcgccgggcggggagacgtgcgcgacg
gtgtcgtacgatcggacgttgaagttgtgg

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