KEGG   Micromonas pusilla: MICPUCDRAFT_25078
Entry
MICPUCDRAFT_25078 CDS       T02696                                 
Name
(RefSeq) pre-mrna splicing factor
  KO
K12849  pre-mRNA-splicing factor 38A
Organism
mpp  Micromonas pusilla
Pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_25078
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_25078
Spliceosome [BR:mpp03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    MICPUCDRAFT_25078
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    MICPUCDRAFT_25078
SSDB
Motif
Pfam: PRP38
Other DBs
NCBI-GeneID: 9681756
NCBI-ProteinID: XP_003056109
JGI: 25078
UniProt: C1ML42
LinkDB
Position
Unknown
AA seq 189 aa
MASSTDPLARSINGLNPQAIIEKITRTKIYESPFWKERCFGVSAATLVDLAMNLRAFGGV
YGSSSKATDFLCLTLKMLQIQPDKEVILEFIKNEDCKYVRILGAFYLRLVGKSFEVYQLL
EPLLLDYRKIRHQTSQGNFELMHVDEFVSALLTRDNFCDISLPRLTHRQLLETSGQLEPR
CGVAVKLRE
NT seq 570 nt   +upstreamnt  +downstreamnt
atggctagttcaaccgacccgctcgctcgcagcataaatggtttgaatccccaggcaatc
attgaaaaaattactcgaacgaaaatatatgaatcgcccttctggaaagaacgttgcttt
ggagtgagtgccgctactcttgtcgatcttgcgatgaatctccgagcgttcgggggtgtt
tacggcagcagcagcaaggcaacggatttcctctgcttgacactgaaaatgcttcaaatt
caacctgacaaggaggttatactcgagtttataaaaaatgaggactgtaaatatgttcgc
attcttggtgcattctatcttcggctggttggaaaatcgttcgaggtatatcaattgttg
gagcctttacttcttgactatcgtaagatcagacatcagacctctcaaggaaattttgaa
ctcatgcacgtagacgagtttgtcagcgcacttttgaccagagacaatttttgtgacatc
tccctacctcgattgacacaccggcagttgctggagacgtcaggtcaactcgagccgcga
tgcggtgtcgcagtcaagctacgcgaatga

DBGET integrated database retrieval system