Micromonas pusilla: MICPUCDRAFT_25078
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Entry
MICPUCDRAFT_25078 CDS
T02696
Name
(RefSeq) pre-mrna splicing factor
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mpp
Micromonas pusilla
Pathway
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_25078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_25078
Spliceosome [BR:
mpp03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
MICPUCDRAFT_25078
Complex C
U4/U6.U5 tri-SnRNP related factors
MICPUCDRAFT_25078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
Motif
Other DBs
NCBI-GeneID:
9681756
NCBI-ProteinID:
XP_003056109
JGI:
25078
UniProt:
C1ML42
LinkDB
All DBs
Position
Unknown
AA seq
189 aa
AA seq
DB search
MASSTDPLARSINGLNPQAIIEKITRTKIYESPFWKERCFGVSAATLVDLAMNLRAFGGV
YGSSSKATDFLCLTLKMLQIQPDKEVILEFIKNEDCKYVRILGAFYLRLVGKSFEVYQLL
EPLLLDYRKIRHQTSQGNFELMHVDEFVSALLTRDNFCDISLPRLTHRQLLETSGQLEPR
CGVAVKLRE
NT seq
570 nt
NT seq
+upstream
nt +downstream
nt
atggctagttcaaccgacccgctcgctcgcagcataaatggtttgaatccccaggcaatc
attgaaaaaattactcgaacgaaaatatatgaatcgcccttctggaaagaacgttgcttt
ggagtgagtgccgctactcttgtcgatcttgcgatgaatctccgagcgttcgggggtgtt
tacggcagcagcagcaaggcaacggatttcctctgcttgacactgaaaatgcttcaaatt
caacctgacaaggaggttatactcgagtttataaaaaatgaggactgtaaatatgttcgc
attcttggtgcattctatcttcggctggttggaaaatcgttcgaggtatatcaattgttg
gagcctttacttcttgactatcgtaagatcagacatcagacctctcaaggaaattttgaa
ctcatgcacgtagacgagtttgtcagcgcacttttgaccagagacaatttttgtgacatc
tccctacctcgattgacacaccggcagttgctggagacgtcaggtcaactcgagccgcga
tgcggtgtcgcagtcaagctacgcgaatga
DBGET
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