KEGG   Micromonas pusilla: MICPUCDRAFT_30693
Entry
MICPUCDRAFT_30693 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K10143  E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]
Organism
mpp  Micromonas pusilla
Pathway
mpp04120  Ubiquitin mediated proteolysis
mpp04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    MICPUCDRAFT_30693
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    MICPUCDRAFT_30693
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:mpp04121]
    MICPUCDRAFT_30693
Enzymes [BR:mpp01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     MICPUCDRAFT_30693
Ubiquitin system [BR:mpp04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    MICPUCDRAFT_30693
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     MICPUCDRAFT_30693
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_Prp19 WD40_MABP1-WDR62_2nd Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_EIPR1 WDR55 Beta-prop_RIG_2nd Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR90_POC16_2nd EIF3I zf-C3HC4_2 Beta-prop_TEP1_C zf-RING_UBOX Beta-prop_EML zf-C3HC4 Beta-prop_IFT122_1st zf-C3HC4_3 WDR90_beta-prop_4th Beta-prop_IFT140_1st zf-RING_2 Beta-prop_SCAP WD40_MABP1-WDR62_1st TAF1C_beta-prop zf-C3HC4_4 NBCH_WD40 Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 Beta-prop_WDR75_1st zf-RING_5 Beta-prop_HPS5 U-box WD_LRWD1 Beta-prop_SPT8 zf-Nse WD40_RFWD3
Other DBs
NCBI-GeneID: 9680757
NCBI-ProteinID: XP_003055415
JGI: 30693
UniProt: C1MH16
LinkDB
Position
Unknown
AA seq 669 aa
MDAASDVHRGGLDDSHACPICRETFSDAFNTMCGHTFCYACIVEHLARAHACPCCAQPLT
AESLFPNLALDKLLKQLSRSGQLPGSPRCPARRTKEIAESINSLPLEELTPLLRSIADKH
DRLVKHDKRVSVGALRDFLALSWKRKNDAIRDLEREVGRIDVDVNWIERQIDELGGSHAL
RALVEERAAATAAAAARAASPNGGGGGGGGGGASAATAAAGREPGEDPPPSPHQPSRARA
SAAASMSLASVDLSETKRARVLANFANLQDLYSKIRCGGFGGLGGGRRKSSEPSAAAARG
DLDEFANLMRSLTKYERARVAGEVRHGERNARLGAGASSIVSSIEFDRDYANFATGGVSK
KVHVFSFAEACGGVDGDRAASDVDAPGPIQTLDAKSKLSCLSYNKHVANHLASSDYEGVV
TVWDVEAGVAVAEFEEHDKRAWTVDYCRVDPRILASGSDDGLVKIWSTAQRGSVLEIDVR
ANVCCVQYGPLSAHQLAVGSADHRVHVFDLRNPSEAIATLRAHRKAVSYVRFLPTGDEMV
SASTDSTLCVWDVKGNVAAGYGILSSAPAATLEGHVNEKNFVGLSVGAGELIACGSETNE
AYVYHKSFNRPILTYDFAEKTERRGGGGGGGGGGDSGPLFVSATCWRGDEPVLLAANSTG
SIKVLQLVE
NT seq 2010 nt   +upstreamnt  +downstreamnt
atggacgccgcgtcggacgtccatcgcggcgggctcgacgactcgcacgcgtgcccgata
tgccgcgagacgttctcggacgcgttcaacaccatgtgcgggcacacgttctgctacgcg
tgcatcgtggagcatctcgcgcgcgcccacgcgtgcccgtgctgcgcgcagccgctcacg
gcggagtcgctgttcccgaatctcgcgctggataagctcctgaagcagctctcgaggagc
gggcagctgccggggagcccgcgatgccccgcgcgacgcacgaaggagatcgcggagagc
atcaacagcctcccgctggaggagctcacgccgttgctccggtcgatcgcggacaagcac
gaccggctcgtgaagcacgacaagcgcgtcagcgtcggcgcgctcagggatttcctcgcg
ctgtcgtggaagcggaaaaacgacgcgattcgcgacctcgagcgcgaggtcgggaggatc
gacgtggacgtgaactggatcgagcggcagatcgacgagctcggcgggagccacgcgctg
cgggcgctcgtcgaggagagggcggcggcgacggcggcggcggcggcgcgcgcggcgtcc
ccgaacggcggcggcggcggcggcggcggcggcggcgcgtcggcggcgaccgccgcggcc
ggccgcgaacccggcgaggatccgccgccttcccctcatcagccgtcgcgcgcgcgcgcg
agcgcggccgcgagcatgtcgctcgcgtccgtggacttgtccgagacgaaacgcgcgagg
gtgctcgcgaacttcgcgaaccttcaggatctgtactcgaagatacgatgcggcggtttc
ggcggtttaggcggcgggcggaggaagagctcggagccgagcgcggcggcggcgcgcggt
gacctcgacgagttcgcgaatctgatgcggtcgctgaccaagtacgagcgcgcgcgcgtc
gccggggaggtgcgacacggcgagcggaacgcgcgcctcggcgcgggcgcgtcctcgatc
gtgtcgtccatcgagttcgatcgcgactacgcgaacttcgccacggggggcgtgtcgaaa
aaagtgcacgtgttcagcttcgcggaggcgtgcggcggcgtcgacggcgaccgcgccgcg
tcggacgtcgacgctcccgggccgatacaaacgctcgacgcgaagagcaagctgtcgtgt
ctgtcgtacaacaagcacgtcgcgaaccacctcgcgagctcggactacgagggcgtcgtc
accgtgtgggacgtcgaagccggcgtcgcggtggcggagttcgaggagcacgacaagaga
gcgtggacggtggattactgccgcgtcgacccgcgcattctcgcgagcggcagcgacgac
ggcctcgtgaagatctggtccacggcgcagcgcggcagcgtgctcgagatcgacgtgcgc
gcgaacgtgtgctgcgtgcagtacggcccgctgagcgcgcatcagctcgcggtcgggagc
gcggaccaccgcgtgcacgtgttcgatctgagaaacccgagcgaggcgatcgcgacgctg
cgcgcgcatcggaaggcggtgtcgtacgtcaggttcttacccaccggcgacgagatggtg
tccgcgtccacggacagcacgctgtgcgtgtgggacgtcaaggggaacgtcgcggccggt
tatgggattctttcttcggcgccggcggcgacgctggaggggcacgtcaacgagaagaac
ttcgtcgggctgtccgtcggcgccggcgagctcatcgcgtgcgggagcgagacgaacgag
gcgtacgtgtaccacaagtcgttcaatcggccgatcttgacgtacgacttcgcggagaag
acggagcggcgcggcggcggcggcggcggcggcggcggcggcgactccggcccgctgttc
gtgtccgcgacgtgctggcgaggggacgagcccgtgctcctcgcggccaactccaccggc
agcatcaaggtgctgcaactcgtggagtga

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