Micromonas pusilla: MICPUCDRAFT_30693
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Entry
MICPUCDRAFT_30693 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K10143
E3 ubiquitin-protein ligase RFWD2 [EC:
2.3.2.27
]
Organism
mpp
Micromonas pusilla
Pathway
mpp04120
Ubiquitin mediated proteolysis
mpp04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
MICPUCDRAFT_30693
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
MICPUCDRAFT_30693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mpp04121
]
MICPUCDRAFT_30693
Enzymes [BR:
mpp01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
MICPUCDRAFT_30693
Ubiquitin system [BR:
mpp04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
MICPUCDRAFT_30693
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
MICPUCDRAFT_30693
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EIPR1
WDR55
Beta-prop_RIG_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
EIF3I
zf-C3HC4_2
Beta-prop_TEP1_C
zf-RING_UBOX
Beta-prop_EML
zf-C3HC4
Beta-prop_IFT122_1st
zf-C3HC4_3
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
zf-RING_2
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
TAF1C_beta-prop
zf-C3HC4_4
NBCH_WD40
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF4
Beta-prop_WDR75_1st
zf-RING_5
Beta-prop_HPS5
U-box
WD_LRWD1
Beta-prop_SPT8
zf-Nse
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
9680757
NCBI-ProteinID:
XP_003055415
JGI:
30693
UniProt:
C1MH16
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MDAASDVHRGGLDDSHACPICRETFSDAFNTMCGHTFCYACIVEHLARAHACPCCAQPLT
AESLFPNLALDKLLKQLSRSGQLPGSPRCPARRTKEIAESINSLPLEELTPLLRSIADKH
DRLVKHDKRVSVGALRDFLALSWKRKNDAIRDLEREVGRIDVDVNWIERQIDELGGSHAL
RALVEERAAATAAAAARAASPNGGGGGGGGGGASAATAAAGREPGEDPPPSPHQPSRARA
SAAASMSLASVDLSETKRARVLANFANLQDLYSKIRCGGFGGLGGGRRKSSEPSAAAARG
DLDEFANLMRSLTKYERARVAGEVRHGERNARLGAGASSIVSSIEFDRDYANFATGGVSK
KVHVFSFAEACGGVDGDRAASDVDAPGPIQTLDAKSKLSCLSYNKHVANHLASSDYEGVV
TVWDVEAGVAVAEFEEHDKRAWTVDYCRVDPRILASGSDDGLVKIWSTAQRGSVLEIDVR
ANVCCVQYGPLSAHQLAVGSADHRVHVFDLRNPSEAIATLRAHRKAVSYVRFLPTGDEMV
SASTDSTLCVWDVKGNVAAGYGILSSAPAATLEGHVNEKNFVGLSVGAGELIACGSETNE
AYVYHKSFNRPILTYDFAEKTERRGGGGGGGGGGDSGPLFVSATCWRGDEPVLLAANSTG
SIKVLQLVE
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgcgtcggacgtccatcgcggcgggctcgacgactcgcacgcgtgcccgata
tgccgcgagacgttctcggacgcgttcaacaccatgtgcgggcacacgttctgctacgcg
tgcatcgtggagcatctcgcgcgcgcccacgcgtgcccgtgctgcgcgcagccgctcacg
gcggagtcgctgttcccgaatctcgcgctggataagctcctgaagcagctctcgaggagc
gggcagctgccggggagcccgcgatgccccgcgcgacgcacgaaggagatcgcggagagc
atcaacagcctcccgctggaggagctcacgccgttgctccggtcgatcgcggacaagcac
gaccggctcgtgaagcacgacaagcgcgtcagcgtcggcgcgctcagggatttcctcgcg
ctgtcgtggaagcggaaaaacgacgcgattcgcgacctcgagcgcgaggtcgggaggatc
gacgtggacgtgaactggatcgagcggcagatcgacgagctcggcgggagccacgcgctg
cgggcgctcgtcgaggagagggcggcggcgacggcggcggcggcggcgcgcgcggcgtcc
ccgaacggcggcggcggcggcggcggcggcggcggcgcgtcggcggcgaccgccgcggcc
ggccgcgaacccggcgaggatccgccgccttcccctcatcagccgtcgcgcgcgcgcgcg
agcgcggccgcgagcatgtcgctcgcgtccgtggacttgtccgagacgaaacgcgcgagg
gtgctcgcgaacttcgcgaaccttcaggatctgtactcgaagatacgatgcggcggtttc
ggcggtttaggcggcgggcggaggaagagctcggagccgagcgcggcggcggcgcgcggt
gacctcgacgagttcgcgaatctgatgcggtcgctgaccaagtacgagcgcgcgcgcgtc
gccggggaggtgcgacacggcgagcggaacgcgcgcctcggcgcgggcgcgtcctcgatc
gtgtcgtccatcgagttcgatcgcgactacgcgaacttcgccacggggggcgtgtcgaaa
aaagtgcacgtgttcagcttcgcggaggcgtgcggcggcgtcgacggcgaccgcgccgcg
tcggacgtcgacgctcccgggccgatacaaacgctcgacgcgaagagcaagctgtcgtgt
ctgtcgtacaacaagcacgtcgcgaaccacctcgcgagctcggactacgagggcgtcgtc
accgtgtgggacgtcgaagccggcgtcgcggtggcggagttcgaggagcacgacaagaga
gcgtggacggtggattactgccgcgtcgacccgcgcattctcgcgagcggcagcgacgac
ggcctcgtgaagatctggtccacggcgcagcgcggcagcgtgctcgagatcgacgtgcgc
gcgaacgtgtgctgcgtgcagtacggcccgctgagcgcgcatcagctcgcggtcgggagc
gcggaccaccgcgtgcacgtgttcgatctgagaaacccgagcgaggcgatcgcgacgctg
cgcgcgcatcggaaggcggtgtcgtacgtcaggttcttacccaccggcgacgagatggtg
tccgcgtccacggacagcacgctgtgcgtgtgggacgtcaaggggaacgtcgcggccggt
tatgggattctttcttcggcgccggcggcgacgctggaggggcacgtcaacgagaagaac
ttcgtcgggctgtccgtcggcgccggcgagctcatcgcgtgcgggagcgagacgaacgag
gcgtacgtgtaccacaagtcgttcaatcggccgatcttgacgtacgacttcgcggagaag
acggagcggcgcggcggcggcggcggcggcggcggcggcggcgactccggcccgctgttc
gtgtccgcgacgtgctggcgaggggacgagcccgtgctcctcgcggccaactccaccggc
agcatcaaggtgctgcaactcgtggagtga
DBGET
integrated database retrieval system