Micromonas pusilla: MICPUCDRAFT_31832
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Entry
MICPUCDRAFT_31832 CDS
T02696
Symbol
CDC48
Name
(RefSeq) cell division cycle protein 48
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
mpp
Micromonas pusilla
Pathway
mpp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
MICPUCDRAFT_31832 (CDC48)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_31832 (CDC48)
03009 Ribosome biogenesis [BR:
mpp03009
]
MICPUCDRAFT_31832 (CDC48)
04131 Membrane trafficking [BR:
mpp04131
]
MICPUCDRAFT_31832 (CDC48)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mpp04147
]
MICPUCDRAFT_31832 (CDC48)
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
MICPUCDRAFT_31832 (CDC48)
Ribosome biogenesis [BR:
mpp03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
MICPUCDRAFT_31832 (CDC48)
Membrane trafficking [BR:
mpp04131
]
SNARE
SNARE associated proteins
Others
MICPUCDRAFT_31832 (CDC48)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
MICPUCDRAFT_31832 (CDC48)
Exosome [BR:
mpp04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
MICPUCDRAFT_31832 (CDC48)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
RuvB_N
AAA_16
AAA_33
CDC48_2
AAA_2
AAA_5
AAA_14
AAA_22
TIP49
NPHP3_N
nSTAND3
RNA_helicase
Mg_chelatase
AAA_17
AAA_28
Parvo_NS1
ATPase_2
AAA_18
Vps4_C
IstB_IS21
Viral_helicase1
ABC_tran
AAA_7
DUF815
NB-ARC
TsaE
NACHT
ResIII
AAA_24
Zeta_toxin
Sigma54_activ_2
KAP_NTPase
Zot
UFD1_N1
Motif
Other DBs
NCBI-GeneID:
9681785
NCBI-ProteinID:
XP_003056149
JGI:
31832
UniProt:
C1MLD8
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MAADSNPETSTNAGKKNLSTAILERKKSPNRLVVDEAVNDDNSVVALNLQKMDELQLFRG
DTVLIKGKKRKDTVCIVLADEFCEEGKIRMNKVVRKNLRVRLGDVVSVHQCTDVKYGQRI
HVLPFSDTIEGVSGNLFDVYLKPYFLEAYRPVRKGDTFLARGGMRGVEFKVVETDPAEYC
IVAPDTEIFCEGEAINREDEERLDEVGYDDVGGVRKQMAQIRELVELPLRHPLLFKTIGV
KPPKGILLYGPPGSGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEK
NAPAIIFIDEIDSIAPKREKTQGEVERRIVSQLLTLMDGMKSRAHVIVMGATNRRNSVDA
ALRRFGRFDREIDIGVPDETGRLEVLRIHTKNMKLDDEVDLEKVSKETHGYVGADLAALC
TEAALQCIREKMDVIDLEDDTIDAEILDSMAVTNEHFITALSVSNPSALRETVVEVPNVS
WEDIGGLESVKQELQETVQYPVEHPEKFEKFGMAPSKGVLFYGPPGCGKTLLAKAIANEC
QANFISVKGPELLTMWFGESEANVREIFDKARQSAPCVLFFDELDSIANQRGSSSGDAGG
AADRVLNQILTEMDGMGSKKTVFIIGATNRPDIIDSALMRPGRLDQLIYIPLPDEKSRLS
IFKANLRKSPLARDVDVDTLASFTNGFSGADITEICQRACKFAIRESIERDIERERFAVA
DPDGMHDEDMFDPVPEITKAHFEEAMKYARRSVSDADIRKYQAFSQTLQQSRGFGNDFRF
PESGPRTNVTGGSVDDGTNHILPGNPTDFAHGVNTNDDEDLYD
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggccgcggattccaacccggagacatccaccaacgctggcaagaaaaacttgtccacg
gcaatacttgagcgcaagaaatcacccaatcgtctcgtcgtagatgaagctgtgaacgat
gataacagcgttgttgcacttaatcttcagaagatggatgaacttcagctttttcgcgga
gacacggttttgattaagggcaagaagcgcaaagataccgtctgtatcgttctcgctgac
gaattctgcgaggaaggcaagattcggatgaacaaagttgttcgtaagaaccttcgtgtt
cgtctcggtgacgtggtatccgtacaccagtgcacagacgtcaaatatggccaacgcatt
cacgtacttcccttcagtgacacgatcgagggtgtgagcgggaatcttttcgacgtatat
ttgaaaccttactttcttgaagcgtatcggccagtccgcaagggtgatacttttcttgca
cgaggtggcatgcgaggtgttgaattcaaggttgttgagacggaccctgcagaatactgc
attgtagcacctgacaccgaaatattttgtgagggagaagcgatcaatcgtgaggacgaa
gaaaggcttgacgaagtcggttatgacgatgtaggcggggtcagaaagcaaatggcacaa
attcgcgaacttgttgagctccccctgcgtcacccgttgctctttaaaacaatcggcgtg
aagcctcccaaagggattctgctctatggccctcctggatcaggtaagactctcatcgcc
cgtgcagtagcaaatgagactggtgctttcttctttctcataaatgggcctgaaattatg
tccaaacttgcgggcgaatctgaatcaaaccttcgtaaagctttcgaggaggcagagaag
aacgccccagctattattttcattgatgaaatagactcaattgcacccaaacgtgaaaaa
actcaaggtgaagtcgagcgtcggattgtttctcaacttctaaccttgatggacggcatg
aaatcgcgagcacatgtcatagtgatgggtgcaacgaacagacgaaattcggtcgacgct
gcacttcgacgttttggacggtttgatcgtgagatagacatcggtgttccagatgaaacc
ggtcgtctcgaagttcttcgtattcacacgaaaaacatgaaactcgacgatgaggtcgac
ctggagaaagtttcgaaagagactcatggttacgtgggtgcagaccttgctgctttatgc
actgaagctgcactgcagtgcattcgtgaaaaaatggatgtcatcgatctcgaagatgat
accattgatgccgaaattttggattcaatggccgttacaaacgaacatttcatcacggca
ctttcagtatcaaacccttctgcactccgcgagactgttgtcgaagttcctaatgtttcc
tgggaagacatcggtggtcttgaatcagtaaagcaagagcttcaagaaacagttcaatac
cctgttgaacacccggagaaatttgagaaatttggaatggcaccttcgaaaggtgttctc
ttctatggtcctccaggttgcggtaagacccttcttgcaaaagcgatcgcaaatgagtgc
caagcaaactttatatctgtgaaaggtccagagcttcttaccatgtggtttggcgaatcg
gaggcaaacgtacgtgagattttcgataaagctcgacaatctgctccatgtgtattattc
tttgatgagcttgattcgatcgccaatcagcgtggatcgagctcaggagacgcaggtggt
gctgctgatcgtgtacttaaccagatacttactgaaatggatggaatgggttcgaaaaaa
actgttttcattattggtgcaacaaatcgcccagatatcatcgattcggctctcatgcgc
cccggtcgattagatcagctaatctacattcctcttcccgatgaaaaatcgcgtctttct
atttttaaggcaaatctgaggaagtctccactcgctcgtgatgtcgatgtcgacacgctt
gctagtttcacgaatggcttttctggggctgatattactgagatttgccagcgtgcatgt
aaatttgcgattcgtgaaagcattgagcgcgacatcgaacgtgagcgtttcgcagttgct
gatccggatgggatgcacgacgaagacatgtttgatcctgtaccggaaataactaaggca
catttcgaagaagcaatgaagtatgcccgtcgttctgtgagtgatgcagatattcggaag
taccaggctttttcacagacactgcagcagtctcgtggatttggtaatgatttccgtttt
cccgaaagcgggccccgcacaaacgttacaggcggtagtgtcgatgacggaaccaaccac
attctgcctggtaacccaactgattttgctcacggtgtgaatacgaacgatgacgaggat
ttatatgactaa
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integrated database retrieval system
