KEGG   Micromonas pusilla: MICPUCDRAFT_32992
Entry
MICPUCDRAFT_32992 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12603  CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_32992
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_32992
Enzymes [BR:mpp01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.4  poly(A)-specific ribonuclease
     MICPUCDRAFT_32992
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     MICPUCDRAFT_32992
  mRNA degradation factors
   3'-5' decay
    Ccr4-NOT complex
     MICPUCDRAFT_32992
SSDB
Motif
Pfam: Exo_endo_phos DUF6902 zf-C6H2
Other DBs
NCBI-GeneID: 9683194
NCBI-ProteinID: XP_003057756
JGI: 32992
UniProt: C1MQG8
LinkDB
Position
Unknown
AA seq 600 aa
MVLTVVRASLNHDTPISGVELTPYVVTRKSDGSSTTADIPESEPSDGCHLQYRWYRSGSH
KKASVCSVHPGEPAVLQNVHSKSYHCGEECFAQSWREWMRDKLARQAAGLGETAPERTPL
WRPPSMKENNAGGSSSNLLSAAGGSMDFNAHHKQERANAYNGDRNKGPGKDEPETWQEVG
RSKTYAATLEDVGHLLRFEVVGAENTTGEPKGGTEGFTTARVIPAPMPPRRNLVPVAHHD
NPDGGKFTVLTYNVLADLYATSELYHYTPSWALSWNYRRQNILKEIVMHDADILCLQEVQ
SDHFEDFFQGELGKHGYTSVYKKKTTQVFSQGTYVIDGCAIFFKKDRFQLIKKYEVEFNK
AALSLVESLGGSSQKKDALNRLMKDNVALIVVLEALEANGQQAPAGKRQLLCVANTHIHA
NTELNDVKLWQVHTLLKGLEKIAASAEIPMVVCGDFNSTPGSAAHNLLTGGRVDAAHPEL
ATDPFGILRPPSKLQHPLPLVSAYTALTKQPCLESEAAERQRSRVDGAGTGEPIFTNCTR
EFFGALDYIFYTDDTLAPLGLLELPAESDVRSKYGGLPNTQSSSDHIPLMAEFQWGARQW
NT seq 1803 nt   +upstreamnt  +downstreamnt
atggtgttgaccgtcgtccgcgcgtcgctgaaccacgacacgccaatctccggcgtggag
ctgacgccttacgtcgtgacgcgcaagtcggacggctcctccacgaccgcggacatcccc
gagagcgaaccctccgacggatgccatctccagtaccggtggtaccgctccggatcgcac
aaaaaggcgagcgtctgcagcgtccacccgggcgagcccgcggtgctccagaacgtgcac
agcaagtcgtaccactgcggcgaggagtgcttcgcgcagtcgtggcgggagtggatgcgg
gacaagctcgcgaggcaggctgcggggttaggggagaccgcgcccgagcgcacgccgctg
tggcgtccgccgtcgatgaaggagaacaacgcgggggggagctcgtcgaacctcctctcc
gccgcgggcgggtccatggacttcaacgcgcaccacaagcaggagcgagcgaacgcctac
aacggcgatcgcaacaaagggccggggaaggacgagccggagacgtggcaagaggtgggc
cgaagcaaaacgtacgcggcgacgctggaggacgtcgggcacctcttgagattcgaagtc
gtcggcgcggagaacacgacgggggagcccaagggcggcacggaggggttcacgaccgcg
cgcgtcatcccggcgccgatgccgccgaggaggaacctcgtcccggtcgcgcaccacgac
aacccggacggcgggaagttcacggtgttgacgtacaacgtcctcgcggatctgtacgcg
acgagcgagctgtatcactacaccccgtcgtgggcgctgtcgtggaactaccgccggcag
aacatcctcaaggagatcgtcatgcacgacgcggatattctgtgtttacaggaagtccag
tccgatcacttcgaggatttcttccaaggcgagctcgggaagcacgggtacacttccgtg
tacaagaagaaaaccacgcaggtgttttcgcaagggacgtacgtcatcgacgggtgcgcg
atcttcttcaagaaggatcggtttcagctgattaaaaagtacgaggtcgagttcaacaaa
gccgcgctgtcgctggtcgagagcttaggagggtcgtcgcagaagaaggacgcgctgaac
cggttgatgaaggacaacgtcgcgctcatcgtcgtcttggaggcgctcgaggcgaacggg
cagcaggcgcccgcggggaaacggcagctcctgtgcgtcgcgaacacgcacatccacgcc
aacacggagctgaacgacgtgaagctgtggcaggtgcacacgctgctgaaggggttggag
aagatcgccgcgagcgcggagatacccatggtggtctgcggcgatttcaactccacgccg
gggtccgccgcgcacaacttactcacgggcgggcgggtcgacgccgcgcacccggagctc
gcgacggatccgtttgggattctgcgaccgccgtcgaagcttcagcaccccttaccgctc
gtgagcgcgtacaccgcgctgacaaagcagccgtgcctggagagcgaggcggcggagcgg
cagcgatcgcgcgtggacggcgcggggacgggggagccgattttcacgaactgcacgcgc
gagtttttcggggcgctggattacatcttctacaccgacgacacgctcgcgccgctcggg
ctgttggagcttcccgcggagagcgacgtccggtcgaagtacggcgggctgccgaacacg
cagtcgtcgagcgatcatatcccgctcatggccgagttccagtggggggcgcggcagtgg
tga

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