Micromonas pusilla: MICPUCDRAFT_36266
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Entry
MICPUCDRAFT_36266 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K11594
ATP-dependent RNA helicase DDX3X [EC:
5.6.2.7
]
Organism
mpp
Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_36266
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_36266
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_36266
Enzymes [BR:
mpp01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MICPUCDRAFT_36266
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
MICPUCDRAFT_36266
mRNA cycle factors
Common to processing body (P body) and stress granule
MICPUCDRAFT_36266
Spliceosome [BR:
mpp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
MICPUCDRAFT_36266
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
MICPUCDRAFT_36266
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
Cas3-like_C_2
ERCC3_RAD25_C
Motif
Other DBs
NCBI-GeneID:
9688615
NCBI-ProteinID:
XP_003063379
JGI:
36266
UniProt:
C1N5K6
LinkDB
All DBs
Position
Unknown
AA seq
513 aa
AA seq
DB search
MEANASFGAPGSIDVSGADPDAPTYGESTAIDFDAYEDIPVETSGEACPEPIASFQDVDF
GAAVNKNIARCKFKNPTPVQKYAIPISLARRDLMACAQTGSGKTAAFCFPIIYGLLDRGL
AGSQRGGRKTFPLALVIAPTRELAIQIHEESRKFAYQTGVASCVIYGGAPAAQQFREMER
GCDILVATPGRLIDLVDRAKISLSEVRYLALDEADRMLDMGFEPQIRQIVEQRDMPPTGE
RQTMLFSATFPREIQRMASDFLKDYIFLTVGRVGSSHTLITQQIEYLRSYEDKKSMLMDL
VHAVKGLTLVFVETKRGADQLEDWLSREGFPSTSIHGDRTQQEREYALKSFRSGRTPILV
ATDVAARGLDIPHVTHVINFDLPSDIDDYVHRIGRTGRAGKKGLATAFFTDKDAGLARSM
IELMTEAGQEVPSFLNGFSGRGGFGGGGKRRGGGRGGGGFGGRDFRSHGGGGGGGGGGGD
WPSRGGGGGGGGGGWGGGGGGGYGGGGGGSAWD
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atggaagcgaacgcgtccttcggcgcgcccgggagcatcgacgtgtcgggcgcggacccg
gacgcgccgacctacggcgagtccacggccatcgacttcgacgcgtacgaggatatcccc
gtggagacgtcgggggaagcgtgcccggagcccatagcgtcgttccaggacgtcgacttc
ggggccgcagtgaacaagaacatcgcgcggtgcaagtttaagaacccgacgccggtgcaa
aagtacgcgattccaatctctttggcgcgtcgggatctcatggcgtgcgcgcagacgggg
tcggggaagacggcggcgttttgcttccccataatctacgggctgctcgaccgcggcctc
gcggggtcgcagcgcggcggccgcaagacgttcccgctcgcgctcgtcatcgcccccacg
cgcgagctcgcgattcagattcacgaggagtcgcggaagtttgcgtaccagacgggcgtc
gcgtcgtgcgtcatctacggcggcgcgccggcggcgcagcaatttcgcgagatggaacga
ggctgcgacatcctcgtcgcgacgcccgggcggctcatcgacctcgtcgaccgcgcgaag
atctcgctgagcgaggtgcgctacctcgcgctggacgaggcggaccggatgttggacatg
gggttcgagccgcagattcgccagatcgtcgagcagcgagacatgccgccgacgggggag
cgacagacgatgctcttctccgcgacgtttccgagggagattcagcgcatggcgtccgat
ttcttgaaagactacatcttcctcaccgtcggtcgcgtcgggtcctcgcacacgctcatc
acgcagcagatcgagtaccttcgatcgtacgaggataagaagagcatgctcatggacctc
gtgcacgcggtgaaggggctgacgttggtcttcgtggagacgaaacgcggcgcggatcag
ctcgaggattggctcagccgagagggcttcccgagcacgagcatccacggcgaccgcacg
cagcaagagcgcgaatacgcgctcaagtccttcaggagcgggcggacgcccatcctcgtc
gcgacggacgtcgccgcgcgcgggctcgacatcccgcacgtcacgcacgtcatcaacttt
gatctgccgtcggacatcgacgactacgtgcaccgcatcggacgcacggggcgcgcgggg
aagaaggggctcgcgaccgcgttcttcacggacaaggacgccgggctcgcgcggagcatg
atcgagctcatgaccgaggcggggcaggaggtgccgagcttcctgaacgggttctccggg
aggggagggttcggagggggagggaagagacggggcggcggccgcggggggggcggcttc
ggcgggagggatttccgcagccacggcgggggaggcggcggcggcggcggcggcggcgac
tggccttcacgaggcgggggaggcggcggcggcggcggaggatggggcggcggcggcggc
ggcgggtacggcggcggcggcggcgggagcgcgtgggactga
DBGET
integrated database retrieval system
