Micromonas pusilla: MICPUCDRAFT_38075
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Entry
MICPUCDRAFT_38075 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K14312
nuclear pore complex protein Nup155
Organism
mpp
Micromonas pusilla
Pathway
mpp03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
MICPUCDRAFT_38075
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_38075
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
MICPUCDRAFT_38075
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_N
Nucleoporin_C
Motif
Other DBs
NCBI-GeneID:
9681233
NCBI-ProteinID:
XP_003055111
JGI:
38075
UniProt:
C1MID7
LinkDB
All DBs
Position
Unknown
AA seq
1717 aa
AA seq
DB search
MQVDGESGPTAADQMQEAARMVSSLQTESEGVDLMTLLRETPREAYSYQQLGWPAEITSM
TTTELPSVVLERYSTRQSVCFCGVLPSIGRAWATVDNALFLWRFDVPNDVPVEYAGEEQA
IVSVGLAKPKPGVFLPSIERVLVVATTTEIALLGVAFESDVEDGASTDGNGARSWGGGMT
LHPLNYSCTTDDVVVKDVAGCDNGRVFFAGDDEALYELEYNAADTWRSRKCRKVCHHSAT
PRLLPSILRLRANDPLKQVCVDEHRCALYTRSENGVVAVYDLGVDCGETPRRIAECRDVA
SAAAMMRGGGGLFSGGYGGGGGGFGGAGGFGGGGGGAGGGQGGHGGASSHAQKGKRLTHI
AVVSAAESATVTLVAVLADGRRVYFTSLPQSTYGGGGGGFGRDARRRVPTACRLAVVQSR
EPPPQGSATRGMTSAQALRATTTVRPLEVEAAFYRDGLLLLCDAADRDEDARLFMAARDV
ALPPHLQLAPGDAAVGGGGGHMGVGGINSGGLGVGVGSPGLGGGGGGVGVGAASHARSLR
EVVTTQQLVGRAASSVGAVGEVPPPRSVTRDLDPPFPLGAPRDLTTAPARLRTELATQFV
APRRRFVAVTNAGIVQLEKARPLDALCKLLAGDVHEQIAQFFRTHGQSEAATMCLAIAVG
GATDARASSEFEVDAANARGGATPSPRGGADRDAGAGGYFGGSPSPSPRTGAFGSASRRT
IIGSPGAGGTPGSSSPAAGGFDGGYERASLGAATLAERARRALEDPRLTGEPHVDEDGVD
GGGGGSIPGGGGGGPFDMGRAVVQPVLRYSGAHRAAYAYAARLLQSTWDRPLAVVVSKHA
AGARQTRGGGAGASAAHLNGGGGASINGGVNGGAMHYGASAARRSTSTTDPLAAAAANGV
EAVGAAATGWLANALRPTHHAGAPVACTLPGDVLASLERRLRPLETFLARRRARTTATGK
QSHGHGGGVNGGARARQRRRLDGPAGALRAEERSIASLRGLLRRTIEAIVLLRVLCENDF
TRLAATLSDDARAALSQARSYSHWSPYDRVRVVNAAARDARDRRDPEQCNEFVAESLGAL
LSVPRAGDVAATCAELADLRCFHGLCALPLAAAAAAANVAAAGDDANILGYGGVASGGLG
AMIGRDGGGGGATNALEPSECWELVCVAIRALATGAADPGAPPFSLGGVCASLPAEERAR
GLATVLERAAQASSPAAAAAATAAAKAAGANAAAAAERAAQAEAAGAPAAPYRPRPPSAA
LVAVAAATPAEVAGACLDGGGVPGGGFGFIRRVYAELESLQRDAELLSLPAGPLEAYLAE
RGAFAVAQQGGALSQDQARHLELLARLYAARERHGLAAQVFFALAERKAQGAAVSLDERE
TLLDLALTHAKSRGPGGDASLNGAGAVASSDVAFIETLEGKITVARFQRRLRATFLERAR
VGGADAREYERFATELERELRPLSDMYNEYARPRALWGMCLEMLHFSRYDDDDGAVAREL
WENLLSQAASDAGGGEGEGVAGDPDPRAALAEACARVRELGPKLHPSEQAFPLAHVALKL
ELMAAGLFATTRPCDDAAELGIVPDALLSATRDSLESVHAAYDRLLATPVQRAHHDRRLA
QEQALQTPALRLRLLRSALRVMRRWDEAVAAQTQTQTGGGGFDAYGANASHVRAALGDVC
AGYAGEARRLLQVPSSEQGAAEALAGEFERLGTRLIG
NT seq
5154 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgacggggagtctggtccgaccgccgcggaccagatgcaggaggccgcgcgc
atggtgtcctcgctccagaccgagtccgagggcgtcgatctcatgacgctcctgagagag
acgccgcgcgaggcgtactcgtaccaacagctcgggtggcccgcggagatcacgtccatg
acgacgacggagctcccctcggtggttctcgaacgctacagcacgcgtcagtccgtgtgc
ttctgcggcgtgctcccgtccatcggccgcgcgtgggcgacggtcgataacgcgctgttc
ctgtggcggttcgacgtcccgaacgacgttccggtggagtacgccggtgaggagcaggcc
atcgtgagcgtaggtctcgccaagccgaagcccggggtgtttctgccgtccatcgagcgc
gtcctcgtcgtcgcgacgacgacggagatcgcgctgctcggcgtcgcgttcgagtcggac
gtggaagacggcgcgtcgaccgacggcaacggcgcgcgatcctggggcggcggcatgacg
ctgcatccgttaaactacagctgcacgacggacgacgtcgtcgtgaaggacgtcgccggg
tgcgacaacggccgcgtgtttttcgccggcgacgacgaggcgctgtacgagctcgaatac
aacgccgcggacacgtggcgctcgcggaagtgccgcaaggtgtgtcaccactccgcgacg
ccgcggttgctgccgtccatcttgaggcttcgcgcgaacgatccgttgaagcaggtgtgc
gtggacgagcatcgatgcgcgctgtacactcggtcggagaacggcgtcgtcgcggtgtac
gacctcggcgtggactgcggcgagaccccgcggaggatcgcggagtgcagggacgtcgcg
agcgccgcggcgatgatgcgcggcggcggcgggctcttcagcggcgggtacggcggcggc
ggcggcggcttcggcggcgccgggggattcggcggaggaggcggcggcgcgggcggcggc
caaggcggccacggcggcgcgtcctcgcacgcgcagaaaggcaagcgtttgacgcacatc
gcggtcgtctccgcggcggagtccgcgacggtgaccctcgtcgccgtcctcgcggacggc
aggcgcgtgtactttacgtctctgccgcagtccacgtacggcggcggcggcggcggtttc
ggtcgcgacgcgcgccgccgcgtccccaccgcgtgccgcctcgcggtcgtgcagtcgcgc
gagccgccgccgcagggcagcgcgacgcgcgggatgacgtccgcgcaagcgctcagggca
acgacgacggtccggccgctcgaggttgaggcggcgttttaccgcgacgggttactcctc
ctgtgcgacgccgcggaccgcgacgaggacgcgcgattgttcatggccgcgcgcgacgtc
gcgctgccgccgcacctgcagctcgcccccggcgacgccgccgtcggcggcggcggcggg
catatgggggttggagggatcaacagcggcgggttgggcgtgggcgtgggctcccccggg
ttgggcggcggcggcggcggcgtcggcgtcggcgcggcgtcgcacgcgcggtccctccgc
gaggttgtcaccacgcagcagctcgtcgggcgcgcggcgtcgtccgtcggcgcggtcggc
gaggtcccgccgccgcggagcgtgacgcgcgacctcgacccgccgttcccgctcggcgcg
ccgcgggatctgacgacggcgccggcgcggttgcggacggagctggcgacgcaattcgtc
gcgccgcggcgtcggttcgtcgccgtcaccaacgcggggatcgtgcagctcgagaaggcg
cggccgctggacgcgctgtgcaagctcctcgccggggacgtccacgagcagatcgcgcag
ttcttccggacgcacgggcagagcgaggcggcgacgatgtgcctcgcgatcgccgtcggc
ggcgcgacggacgcgagggcgtcgagcgagtttgaagtcgacgcggccaacgcgcgagga
ggcgcgacgccgtcccctcgcggcggcgcagatcgcgacgccggcgcgggcgggtacttc
ggcggatcgccatcgccctccccgaggaccggcgcgttcgggagcgcgagccgccggacg
atcatcggctctcccggcgcgggaggcaccccggggtcgtcgtcgcccgcggcgggcggg
ttcgacggcggctacgagcgcgcctccctcggcgccgccaccctcgccgagcgcgcgcgt
cgagcgctcgaggacccgcggctcacgggcgagccgcacgtcgacgaggacggcgtcgac
ggcggcggcggcggttcgatccccggcggcggcggcggcgggccgttcgacatgggacgc
gccgtcgtgcagccggtgttgcgatacagcggcgcgcatcgcgcggcgtacgcgtacgcc
gcgcgattgctgcagtcgacgtgggaccgcccgctcgcggtcgtcgtgagcaagcacgcg
gcgggcgcgcggcagacgcgcggcggcggcgcgggcgcttccgcggcgcatctgaacggg
gggggcggcgcgtcgatcaacggcggcgtgaacggcggcgcgatgcactacggtgcgtcg
gcggcgcgtcgatcgacgtcgacgacggacccgctcgcggcggcggcggcgaacggcgtg
gaagccgtcggcgccgccgcgaccggatggctcgcgaacgcgctgcgcccgacgcaccac
gccggcgcgccggtcgcgtgcacgctccccggcgatgtcctcgcgagcctggagcgtcgg
ttacggccgttggagacgtttttggcgaggcggcgcgcgcggacgactgctacgggcaaa
cagtctcacggccacggcggcggggttaacggcggcgcgagggcgcggcagcggcggcgg
ttggacggccccgcgggcgcgctgcgcgcggaagagcgcagcatcgcgtcgctccgcggg
ctgcttcgccgcacgatcgaggcgatcgtgttgcttcgcgtgctgtgcgagaacgacttc
acgaggctcgccgcgacgttgtcggacgacgcgcgcgcggcgctctctcaggcgcgttcg
tattcacactggtccccatacgaccgcgttcgcgtggtgaacgccgcggctcgcgacgcg
cgcgatcgacgcgaccccgagcagtgcaacgaattcgtcgccgaatccctcggcgccctg
ctctccgtccctcgcgcgggcgacgtcgccgcgacgtgcgcggagctcgcggatctccgc
tgcttccacggcctctgcgcgctccccctcgcggcggcggcggccgccgcgaacgtcgcc
gcggccggggacgacgcgaacatcctgggctacggcggcgtcgcgagcggcggtttgggc
gcgatgatcgggcgcgacggcggcggcggcggcgcgacgaacgcgctcgagccgtccgag
tgctgggagctcgtctgcgtcgcgatccgcgcgctcgcgaccggcgcggcggaccccggc
gcgccgcccttctccctcggcggcgtctgcgcgagtctccccgcggaggagcgcgcgcgc
gggctcgcgacggtgctcgaacgcgcggcgcaagcgtcgtcgcccgcggcggcggcggcg
gcgaccgcggcggcgaaagccgccggcgcgaacgccgcggcggcggccgagcgcgcggcg
caagcggaagccgcgggcgcgcccgcggcgccgtaccgcccgcgcccgccctccgcggcg
ctcgtcgcggtcgccgcggcgacgcccgcggaggtggcgggcgcgtgcctcgacggcggc
ggcgtccccggcggcggctttggattcatccgccgcgtctacgccgagctcgaatccctc
cagcgagacgcggagctgctgtctctccccgcgggcccgctcgaggcgtacctcgccgag
cgcggcgccttcgcggtcgcgcagcagggcggcgcgctgtcgcaggaccaagcgcggcac
ctcgagctgctcgcgcggctgtacgcggcgagggaacgccacggcctcgccgcgcaagtc
ttcttcgcgctcgcggagcgcaaggcgcagggcgcggcggtgtccctggacgagcgcgag
acgctgctggatctcgcgctgacgcacgccaagtcgagagggccgggcggggacgcgagc
ttgaacggcgccggggccgtggcgagctcggacgtcgcgttcatcgagacgctggagggg
aagatcaccgtggcgcggtttcaacggcggctgcgcgcgacgtttctcgagcgcgcgcgc
gtcggcggcgcggacgcgcgcgagtacgagcgctttgcgaccgagctcgagcgcgagctg
cgccctctgagcgacatgtacaacgagtacgcacgcccgcgcgcgctgtgggggatgtgc
ctcgagatgttacacttttctcgctacgacgacgacgacggcgccgtcgcgcgcgagctc
tgggagaacctcctctcccaggctgcctcggacgcgggcggcggcgaaggcgaaggcgtc
gccggcgaccccgacccgagagccgcgctcgcggaggcgtgcgcgcgcgtccgcgagctc
ggaccgaagctgcatccgagcgagcaagccttcccgctcgcgcacgtggcgctcaagctg
gagctcatggccgccgggctcttcgcgacgacgcgcccgtgcgacgacgccgccgagctc
ggtatcgtcccggacgcgctcctctccgcgacgcgcgactcgctcgagtccgtgcacgcg
gcgtacgaccggctcctcgcgacgccggtgcagcgcgcgcatcacgaccggcgcttggcg
caggagcaggcgttgcagacgccggcgctgcggctgcgattgttgcggtcggcgttgcgg
gtgatgcggcggtgggacgaggcggtcgccgcgcagacgcagacgcagactggcggcggc
gggttcgacgcgtacggcgcgaacgcgtcgcacgtgcgcgcggcgctcggggacgtgtgc
gcggggtacgccggggaggcgcggcggctgttgcaggtgccgagctcggagcagggcgcc
gcggaggcgctggcgggggagttcgagaggctcgggacgcggttgatcggttga
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