Micromonas pusilla: MICPUCDRAFT_43771
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Entry
MICPUCDRAFT_43771 CDS
T02696
Name
(RefSeq) uncharacterized protein
KO
K12880
THO complex subunit 3
Organism
mpp
Micromonas pusilla
Pathway
mpp03013
Nucleocytoplasmic transport
mpp03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
MICPUCDRAFT_43771
09122 Translation
03013 Nucleocytoplasmic transport
MICPUCDRAFT_43771
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_43771
03041 Spliceosome [BR:
mpp03041
]
MICPUCDRAFT_43771
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
MICPUCDRAFT_43771
Spliceosome [BR:
mpp03041
]
Complex C
Other components
EJC/TREX
MICPUCDRAFT_43771
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
MICPUCDRAFT_43771
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR5
Beta-prop_WDR3_1st
WD40_CDC20-Fz
WD40
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WDR55
EIF3I
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT122_1st
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
WD40_Gbeta
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_EML
Beta-prop_WDR75_1st
eIF2A
Beta-prop_WDR35_TULP_N
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
Beta-prop_HPS5
Beta-prop_IFT140_1st
Beta-prop_Vps41
Tricorn_2nd
WD40_RFWD3
PD40
NBCH_WD40
Beta-prop_RIG_1st
Beta-prop_NUP159_NUP214
Beta-prop_DCAF12
Beta-prop_WDR41
Beta-prop_TEP1_C
Beta-prop_SCAP
Beta-prop_Nup120_160
Beta-prop_ACSF4
Motif
Other DBs
NCBI-GeneID:
9680801
NCBI-ProteinID:
XP_003054827
JGI:
43771
UniProt:
C1MGS6
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MVAAFDTAGAISREIVGHKKKVHSVAWNRAGRKLASGSVDQSARVWDVEHGVQSGKEIEL
KGHSDSVDQLTWDPSQSDVLASVSADKTLRIWDARAAGGSRCVAKVDTSGENINVAWSPD
GGTIAVGDRDDVVSFVDARKHKIIKTTKFPFEVNEIDWDNAGARFYLTTGLGTVEVLEFP
SMTAAHTIHAHTAGCYCIAFDPTGAHFAVGSADALVSIWDARESACVRTVPRLEWPVRTL
SFSADGTYLASASEDLFIDIADVATGECAHKITTRAASNAVAWSPTELLLAYAGDDKAGE
GGGREGTIRIWGKPGARSD
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggtggccgcgttcgacaccgcgggcgcgatctcgcgcgagatcgtcggccacaagaag
aaggtccactccgtggcgtggaaccgcgcgggtcggaagctcgcgtccggctcggtcgat
cagtccgcgcgcgtgtgggacgtcgagcacggcgtgcagagcggcaaggagatcgagctg
aagggccacagcgacagcgtggaccagctcacgtgggacccgtcgcagtcggacgtcctc
gcgagcgtgagcgcggacaagacgctgcggatatgggacgcgcgcgccgcgggcgggtcg
aggtgcgtcgcgaaggtggacacgtcgggggaaaacatcaacgtcgcgtggtcgcccgac
ggcggcacgatcgcggtcggcgaccgcgacgacgtcgtctccttcgtcgacgcgcggaag
cacaagatcatcaagacgaccaagttcccgttcgaggtgaacgagatcgactgggacaac
gcgggcgcgcggttttacctcacgacggggctgggcacggtggaggttctagagtttccc
tccatgaccgcggcgcacacgatacacgcgcacaccgcggggtgttactgcatcgcgttc
gaccccacgggcgcgcacttcgcggtcgggagcgcggacgcgctcgtgtccatctgggac
gcgagggagagcgcgtgcgtgcggacggtgccgcggttggagtggccggtgcggacgctg
tcgttttcagcggacgggacgtacctcgcgagcgcgtcggaggatctgttcatcgacatc
gcggacgtcgcgacgggggagtgcgcgcataagatcacgacgagggcggcgtcgaacgcg
gtcgcgtggtcgccgacggagctgttgctggcgtacgcgggggacgacaaggcgggcgag
gggggcgggcgcgagggcacgattcgaatctggggcaaaccaggagcgaggagcgactga
DBGET
integrated database retrieval system