KEGG   Micromonas pusilla: MICPUCDRAFT_43771
Entry
MICPUCDRAFT_43771 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12880  THO complex subunit 3
Organism
mpp  Micromonas pusilla
Pathway
mpp03013  Nucleocytoplasmic transport
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_43771
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUCDRAFT_43771
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_43771
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_43771
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     MICPUCDRAFT_43771
Spliceosome [BR:mpp03041]
 Complex C
  Other components
   EJC/TREX
    MICPUCDRAFT_43771
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    MICPUCDRAFT_43771
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40_Prp19 Beta-prop_WDR5 Beta-prop_WDR3_1st WD40_CDC20-Fz WD40 Beta-prop_EML_2 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 ANAPC4_WD40 WDR55 EIF3I Beta-prop_WDR36-Utp21_2nd Beta-prop_IFT122_1st Beta-prop_Aladin Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd WD40_Gbeta Beta-prop_RIG_2nd Beta-prop_WDR19_1st Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_1st WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_WDR75_1st eIF2A Beta-prop_WDR35_TULP_N Beta-prop_EIPR1 Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_HPS5 Beta-prop_IFT140_1st Beta-prop_Vps41 Tricorn_2nd WD40_RFWD3 PD40 NBCH_WD40 Beta-prop_RIG_1st Beta-prop_NUP159_NUP214 Beta-prop_DCAF12 Beta-prop_WDR41 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_Nup120_160 Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 9680801
NCBI-ProteinID: XP_003054827
JGI: 43771
UniProt: C1MGS6
LinkDB
Position
Unknown
AA seq 319 aa
MVAAFDTAGAISREIVGHKKKVHSVAWNRAGRKLASGSVDQSARVWDVEHGVQSGKEIEL
KGHSDSVDQLTWDPSQSDVLASVSADKTLRIWDARAAGGSRCVAKVDTSGENINVAWSPD
GGTIAVGDRDDVVSFVDARKHKIIKTTKFPFEVNEIDWDNAGARFYLTTGLGTVEVLEFP
SMTAAHTIHAHTAGCYCIAFDPTGAHFAVGSADALVSIWDARESACVRTVPRLEWPVRTL
SFSADGTYLASASEDLFIDIADVATGECAHKITTRAASNAVAWSPTELLLAYAGDDKAGE
GGGREGTIRIWGKPGARSD
NT seq 960 nt   +upstreamnt  +downstreamnt
atggtggccgcgttcgacaccgcgggcgcgatctcgcgcgagatcgtcggccacaagaag
aaggtccactccgtggcgtggaaccgcgcgggtcggaagctcgcgtccggctcggtcgat
cagtccgcgcgcgtgtgggacgtcgagcacggcgtgcagagcggcaaggagatcgagctg
aagggccacagcgacagcgtggaccagctcacgtgggacccgtcgcagtcggacgtcctc
gcgagcgtgagcgcggacaagacgctgcggatatgggacgcgcgcgccgcgggcgggtcg
aggtgcgtcgcgaaggtggacacgtcgggggaaaacatcaacgtcgcgtggtcgcccgac
ggcggcacgatcgcggtcggcgaccgcgacgacgtcgtctccttcgtcgacgcgcggaag
cacaagatcatcaagacgaccaagttcccgttcgaggtgaacgagatcgactgggacaac
gcgggcgcgcggttttacctcacgacggggctgggcacggtggaggttctagagtttccc
tccatgaccgcggcgcacacgatacacgcgcacaccgcggggtgttactgcatcgcgttc
gaccccacgggcgcgcacttcgcggtcgggagcgcggacgcgctcgtgtccatctgggac
gcgagggagagcgcgtgcgtgcggacggtgccgcggttggagtggccggtgcggacgctg
tcgttttcagcggacgggacgtacctcgcgagcgcgtcggaggatctgttcatcgacatc
gcggacgtcgcgacgggggagtgcgcgcataagatcacgacgagggcggcgtcgaacgcg
gtcgcgtggtcgccgacggagctgttgctggcgtacgcgggggacgacaaggcgggcgag
gggggcgggcgcgagggcacgattcgaatctggggcaaaccaggagcgaggagcgactga

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