KEGG   Micromonas pusilla: MICPUCDRAFT_45923
Entry
MICPUCDRAFT_45923 CDS       T02696                                 
Name
(RefSeq) dead-box ATP-dependent RNA helicase
  KO
K12823  ATP-dependent RNA helicase DDX5/DBP2 [EC:5.6.2.7]
Organism
mpp  Micromonas pusilla
Pathway
mpp03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    MICPUCDRAFT_45923
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mpp03041]
    MICPUCDRAFT_45923
   03009 Ribosome biogenesis [BR:mpp03009]
    MICPUCDRAFT_45923
Enzymes [BR:mpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     MICPUCDRAFT_45923
Spliceosome [BR:mpp03041]
 Complex A
  U1 snRNP components
   U1 related factors
    MICPUCDRAFT_45923
 Complex B
    MICPUCDRAFT_45923
Ribosome biogenesis [BR:mpp03009]
 Eukaryotic type
  Pre-60S particles
   Helicases
    MICPUCDRAFT_45923
SSDB
Motif
Pfam: DEAD Helicase_C ResIII AAA_30 ERCC3_RAD25_C CMS1
Other DBs
NCBI-GeneID: 9688852
NCBI-ProteinID: XP_003063205
JGI: 45923
UniProt: C1N5S0
LinkDB
Position
Unknown
AA seq 479 aa
MEITVKAPRGIQTPDPQQTFAEGGWPQQLLDAVTRAGYTSPTPIQAQSWPIALQGYDLIS
VAKTGSGKTVGYLFPGIMHIRARANGPRPVGPTVAVLAPTRELATQIQEETAKFGRAIGM
FSVCLYGGAPKGMQLRELRSGPQIAIATPGRLNDFLESGAVNLGSATYVVLDEADRMLDM
GFEPQIRKILARAPPARQARSISHWSPCDPTLFFTATWPKAVVRVATAILTNPIQVNIGD
TDSLVANKDISQVIEVCGGFQKQQRLMEVLRNPPAQPLKAIVFCSTKRMCDQIGRSMGGM
GAVIHGDKEQRERDYIINQFKSGRVPVLVATDVAARGLDIKEVNLVVNFDFPNQIEDYVH
RIGRTGRAGNKGHAHSFIEPGEGNMARKLIPILRDAGQTVSPEIQEMATRGGGGGGGGRG
RGGGGGFRGGGGGGFRGGGSSYGGGGGYSGGGYGGGGTGGYANGGGNSGYGGGGSYGGY
NT seq 1440 nt   +upstreamnt  +downstreamnt
atggagatcaccgtgaaggcgccgagggggatccaaacccccgacccccagcagacgttc
gcggagggcggctggccgcagcagctcctggacgcggtcacgcgcgccgggtacacgagc
ccgacgccgatccaagcgcagtcgtggccgatcgcgctgcaagggtacgacctcatctcc
gtcgcgaagacggggtcggggaaaaccgtgggctaccttttcccgggcatcatgcacatc
cgagcgcgcgccaacgggcccaggccggtcggtccgaccgtcgccgtcctcgcgccgacg
cgcgagctcgcgacgcagatccaggaggagaccgcgaagttcgggagggcgatcgggatg
ttctccgtgtgcctctacggcggcgcgccgaaagggatgcagctacgagagctgcgatcg
gggccgcagatcgccatcgcgacgccgggccgtctgaacgacttcctcgagtccggcgcc
gtgaacctcggcagcgcgacgtacgtcgtgttggacgaggcggacaggatgctcgacatg
gggttcgagccgcagattcggaagattttggcgagggcgccgccggcgaggcaggcgcgt
tctatctcacactggtccccatgcgaccccacgctcttcttcaccgccacctggcccaag
gctgtggtgcgcgtcgcgacggcgatcctcacgaacccgatccaggtcaacatcggcgac
acggactcgctcgtggcgaacaaggacatctcgcaggtgatcgaagtatgcggcgggttc
cagaagcagcagagactgatggaagtgcttcggaaccctcccgcgcagccgctcaaggcg
atcgtgttttgcagcacgaaacgcatgtgcgatcagatcggacgcagcatgggcgggatg
ggcgcggtgatccacggcgataaggagcagcgcgagcgcgattacatcatcaaccagttc
aagagcgggcgggtccccgtgctcgtggccacggacgtcgccgcgcgcgggctcgacatc
aaggaggtgaacctcgtcgtgaactttgactttccgaaccagatcgaggattacgtccat
cggatcgggcgaaccggccgcgcggggaacaaagggcacgcgcactcgttcatcgaaccc
ggtgaggggaacatggcgaggaagctgattccgatcttgcgcgacgccgggcagacggtg
tcgccggagattcaggagatggcgacccgcggcggcggcggcggcggcggcgggcgcgga
agaggcggcggcggcggcttccgcggcggcggcggcggtggcttccgcggcggcgggtcc
agctacggcggcggaggaggatattctgggggcggatatggaggagggggaacgggcgga
tatgcgaacggcggcggaaattcggggtacggcggcgggggatcgtacggcgggtattaa

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