Micromonas pusilla: MICPUCDRAFT_47037
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Entry
MICPUCDRAFT_47037 CDS
T02696
Name
(RefSeq) transcription factor TFIID with WD40 repeat
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
mpp
Micromonas pusilla
Pathway
mpp03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
MICPUCDRAFT_47037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpp03021
]
MICPUCDRAFT_47037
03036 Chromosome and associated proteins [BR:
mpp03036
]
MICPUCDRAFT_47037
Transcription machinery [BR:
mpp03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
MICPUCDRAFT_47037
Coactivators
SAGA/TFTC/STAGA complex
MICPUCDRAFT_47037
Chromosome and associated proteins [BR:
mpp03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
MICPUCDRAFT_47037
STAGA complex
MICPUCDRAFT_47037
TFTC complex
MICPUCDRAFT_47037
SAGA complex
MICPUCDRAFT_47037
SLIK complex
MICPUCDRAFT_47037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
TFIID_NTD2
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML_2
Beta-prop_TEP1_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
ANAPC4_WD40
Beta-prop_WDR75_1st
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
NBCH_WD40
WDR90_beta-prop_4th
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_1st
Beta-prop_IFT140_1st
Beta-prop_EIPR1
LisH
Beta-prop_SPT8
Beta-prop_Nup120_160
Beta-prop_WDR19_1st
Beta-prop_DCAF4
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_WDR11_2nd
WD40_RFWD3
Motif
Other DBs
NCBI-GeneID:
9683553
NCBI-ProteinID:
XP_003057739
JGI:
47037
UniProt:
C1MQE2
LinkDB
All DBs
Position
Unknown
AA seq
745 aa
AA seq
DB search
MADAAKDETDPLDRIVLRYLQKRGYKDAEKALKSEANIASVSQMALVPHLGADATISDHI
LYYNEAADGDPVALVHGYRLLRDWTHAALDMYKPELLRILYPMFVYCHLDLVSRDHGAVA
REFHRRFGDDHLLLHGDVVRSLRGLATPAHLAKDSTAKTLRENRLPVRCCKYTFDLLLKY
LHNANQIALLAVLNAHVAVTVTVGDPEPHADEEDIVARNTITGQGPPSKTDAFNASKEGR
WGVLVDCVELQAADEFEEEKIRTANAKKERERKSGGGGGGEGGEGEDDDKEGGGEEKEKS
TPTKSKKKAAADAAKEKEEAEAAEKEKGPELTIVSSEVPVPELSYEARWESIEDIRYRAR
ISKDALPSCAFYTFTHAHEHLVCATTSSDAALVVGGFQDSVVRVWDMNKSVPGGTDKYDT
DPASRKRLKRREAGYDQLPDGDDDDDDDDDEEFKEKGGGGDGEIPAKGTKVATPLYCKEY
IGHSSAVHAVSLSPGNEFLLSCSRDSTVRAWSMQLEMPLCAYRSHNYPVWDVKWAPTGHY
FASASHDKTARVWAMDVATPRRIMVGHLADVDVVTWHPNCNYIATGSSDRTLRLWDVSTG
ECVRIFTGHRGGIRSIAMSPDGKSMASGSDDGGILTWDLGSAKCERAFAGHAGAVYSLDY
AGGDATLLASGGADETVRLWDVTTGSGSVVAGGGGTAGGGTKKRAGAVKTLRTRSTPVYA
VKFTRRNLLIGMGARAPPKSREAVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgccgctaaggacgaaaccgaccctctcgatcgcatcgtcctgcgctacctc
caaaagcgcgggtacaaggacgcggagaaggcgctcaagtccgaggcgaacatcgcgagc
gtctcgcagatggcgctcgtcccgcacctcggcgcggacgcgacgatctcggaccacatc
ctgtactacaacgaggccgcggacggggacccggtcgcgctcgtgcacgggtaccggctc
ctgagagactggacgcacgcggcgctggacatgtacaagcccgagctcctgcgcatcctg
tacccgatgttcgtgtactgccacctcgatctcgtgtctcgcgaccacggcgccgtcgcg
agagagttccaccgacgattcggcgacgatcacctcctcctccacggcgacgtcgtgcga
tccctccgcgggctcgcgacgcccgcgcacctcgcgaaggattcgaccgcgaagacgctg
cgagagaaccgcctccccgtgcgatgctgcaagtacacgttcgacctgcttctcaagtat
ctccacaacgcgaatcagatcgcgttgctcgccgtgctcaacgcgcacgtcgcggtgacg
gtgaccgtcggcgacccggagccgcacgcggacgaggaggatatcgtggcgaggaacacg
atcacggggcagggcccgccgagcaagacggacgcgttcaacgcgagcaaggagggaagg
tggggggtgctcgtggactgcgtggagctgcaggcggcggatgagttcgaggaggagaag
attcgaacggcgaacgcgaaaaaggagagggagaggaagagcggcggcggcggcggcggc
gagggcggcgagggcgaggacgacgacaaggaaggcggcggcgaagagaaggagaaatcc
acgccgaccaagtcgaagaagaaggcggcggcggacgcggcgaaggagaaggaggaggcg
gaggctgcggagaaggaaaaaggcccggagctcaccatcgtctcgagcgaggtccccgtg
ccggagctgtcgtacgaagcgcggtgggagtcgatcgaggacattcgctaccgcgcgcgg
atcagcaaagacgcgctgccgtcgtgcgccttctacacgttcacgcacgcgcacgagcat
ttagtctgcgcgacgacgtcgtcggacgccgcgctcgtcgtcggcgggttccaagactcc
gtcgtcagggtgtgggacatgaacaagtccgttccgggcgggacggacaagtacgacacg
gaccccgcgtcgagaaagcggctgaagcgcagggaggcggggtacgatcagctccccgac
ggcgacgacgacgacgacgacgacgacgacgaggagttcaaagaaaaaggcggcggcggc
gacggcgaaataccggcgaagggcacgaaagtagcgacgccgctgtactgcaaggagtac
atcggacactcctccgcggtgcacgcggtgagcttgagccccgggaacgagttcctgctc
tcgtgctcgagggactcgaccgtgcgggcgtggtcgatgcagctcgagatgccgctgtgc
gcgtaccggtcgcacaactacccggtctgggacgtgaaatgggcgccgacgggccattac
ttcgcgtccgcgtcgcacgacaagaccgcgcgcgtgtgggcgatggacgtcgcgacgccg
cgcaggatcatggtcgggcatctcgcggacgtggacgtcgtgacgtggcacccgaactgc
aactacatcgccaccgggtcgtccgatcgaactttgagactgtgggacgtgtccacgggc
gagtgcgtgcgaattttcaccgggcaccgcggcgggattcgatcgatcgcgatgtccccc
gacgggaagtccatggcctcaggcagcgacgacggcgggatcctgacctgggacctcggc
tccgccaagtgcgaacgcgcgttcgccgggcacgcgggcgcggtgtattccctggattac
gccggcggagacgcgacgttgctcgcgtccggcggcgcggacgagaccgtgcgtctgtgg
gacgtcacgaccgggagcgggagcgtcgtcgcgggcggcggcgggacggcgggggggggg
acgaagaaacgtgccggcgcggtcaagacgttgaggacgagatcgacccccgtgtacgcg
gtgaagtttacgcgacgtaatttgttgattgggatgggcgcgagggcgccgcccaagtcg
cgagaggccgtcgcgtga
DBGET
integrated database retrieval system
