KEGG   Micromonas pusilla: MICPUCDRAFT_47634
Entry
MICPUCDRAFT_47634 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K13026  ATP-dependent RNA helicase DHX57 [EC:5.6.2.6]
Organism
mpp  Micromonas pusilla
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:mpp03012]
    MICPUCDRAFT_47634
Enzymes [BR:mpp01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.6  RNA 3'-5' helicase
     MICPUCDRAFT_47634
Translation factors [BR:mpp03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    MICPUCDRAFT_47634
SSDB
Motif
Pfam: OB_NTP_bind HA2_C Helicase_C RWD UBA_DHX29 DEAD zf-C2H2_4 TSTD2_N HA2_N zf-C2H2 zf-Di19 zf-C2HC_2 AAA_16 FtsK_SpoIIIE dsrm zf-C2HE AAA_14 nSTAND3
Other DBs
NCBI-GeneID: 9685118
NCBI-ProteinID: XP_003059966
JGI: 47634
UniProt: C1MWQ5
LinkDB
Position
Unknown
AA seq 1681 aa
MAPSQRSAENFNKKAAAKLKRGIVSTGAAGMSNKGPDPASLKPKELPCPHCDRLFKQQDR
LKQHVAKHHAKEVEEAAAAAKAKAEAEAAGADAAKTPGGGDRGGRGGNNADAATRREENY
KGPMREGVVFRASTREPKIILQEYISKKKDSKKPKYVLKEEPDGKGWSCKVVIADKYKPE
KDVVVFSDGEPRASKEAATQHGAVAALAYRDAFASLEEKGRLKAEKAARDAEARERRAKH
RPKERQRETLHMSEEKRHQVEGLLRGISGDGDGARDDDGGETTALDDDAATALTAALATL
GFTTSDATAAVQVVRSGTRRDAKDAALDWLVLNVPESRLPRTFAPDAKSDGVVLMDTAAA
FAPAGSKAGSDGGGFGGSKPKPKRPERRAAEARPSDADAAWLWDRGYTAAEASDALAAAD
GGGRDRALEALFRETLVRATDGRDWSAWPSTGGGGGERGGGGGGGDDDDDGGDDPWEDEL
VAVEAIFGDDVVSRPSRDVVIVTVDVDDGRGGKGKVALEVRRPSGGGYPTEEPPTISLAA
ASGDGATSRGALRAATASLAAAAAAAAEDGIPCVHSLAELLPGALAERADAPAPGEGAGE
EEEEEEEETDAVKEEKEEIVVGAAKASSSSIPAPRAGVAVVAAPPRASSTPTKSAPKVGT
RGTDRDRNRPRGRDAALSPSEAAAESARLKAAQESYFSGGGGSGAASKMVATRANLPASA
SREEVVRAVDGSPVVVLSGETGCGKSTQVPQFILESAIDKRAGGSCNIVCTQPRRISAIG
LAERVASERVENCGDVVGVTHVVLDEVHERSVESDLLLLLLRRVICGARKDLKIVLMSAT
ADADFFAAYFSEPSAASVAAGGVVATPSSKVFIEGFTHPVREYFLEDVLELTGYAIGKAS
KYAKKKGSGGGGGGEDILLIDTVEMRADADAATDAADADAVADADAADDAASPAPPVEEE
DVPETWEETPEDRVAPTATATSDDATSASDTLWDTDADATRARARAAKTGAARADAAADD
AARAKRDELAFASANLANEASYGEATRRSIANVDESLLNYELIERLIAKIIRVELSEGER
ALVAPSAAPGRGGKRSPGESDSKGAILVFLPGQAEINRLIRQLERSQFLEPHDVGELLFL
PLYGALSGADQRKIFAPPPRGARKIVVATNIAETSVTIDDVRYVVDAGHTPRRLSTPLLT
PFDSTPTFVASRGPSTLSHDSTRGMSVLADAWVSRAAAKQRRGRAGRVSPGARFALFSRA
QFARMSDHQPPEMLRTPLQQLCLNVKAMAPGVGVETTLCAAPTPPPRDAVRAALDELMAL
RALDVRRDSATSASSDGAVSSDAEKHPNNPETLTPLGKHLAHMPVDARVGKMLLFGALLG
CLDPILTIAAAMSGRQLFVSPKDKKAEADAMKKKIAAPGKSDHLTMASAYAAWWKCPGAG
ARRKHADERFLSHQALEGIMASRLDYAGVLADLGFIPRVYVRAMRRDGAGGGDADRNASV
ARVVKAALVAGFYPQVVRVQHPETKFVNTAGGAREKESVDGRGVKYFCKDVGRVFLHPSS
VNVASGKFDSPWLVYSERVETARVYVRDNTMVGAYALLLFGGELVVDHARGRLSMDGWAE
FDAPARVGVLVREMRAAVDALLEKHIDQPREEDGDGDDDSMKLASSPVVKALLELLASEG
R
NT seq 5046 nt   +upstreamnt  +downstreamnt
atggcgccctcgcagcgcagcgcggaaaacttcaacaagaaggccgccgcgaagctcaag
cgcgggatcgtctccaccggcgccgcggggatgtcgaacaaaggcccggacccggcgtcg
ctgaagccgaaggagctcccgtgcccgcactgcgaccggcttttcaagcagcaagaccgc
ctgaagcagcacgtcgcgaagcaccacgcgaaagaggtggaagaggctgccgcggcggcg
aaagcgaaagcggaagcggaagcggcgggcgcggacgccgcgaagacgcccggcggcggc
gaccgcggcggccgcggcggtaacaacgcggacgcggcgacgcgacgggaagagaattat
aaggggccgatgcgagagggcgtcgtcttccgcgcgtccacgcgagaaccgaagatcatc
cttcaggagtacatctcgaagaagaaggactcgaagaagccgaagtacgtcctcaaagag
gagccggacgggaaaggatggagctgcaaggtggtcatcgcggacaagtacaagccggag
aaggacgtcgtcgtcttcagcgacggggagccgcgcgcgagcaaggaggcagcgacgcag
cacggcgccgtcgccgcgctcgcgtaccgcgacgcgttcgcgagcctggaggagaagggg
cggctcaaggcggagaaagcggcgagggacgcggaagcgagggagcgacgcgcgaagcac
agaccgaaggagcggcagcgagagacgctgcacatgtccgaggagaaaaggcaccaggtc
gagggattgctgcgaggcatctccggcgacggcgacggagcgcgcgacgacgacggggga
gagacgaccgccttggacgacgacgccgcgacggcgctgaccgcggcgctcgcgacgtta
gggttcaccacctcggacgcgaccgcggcggttcaggtcgtgagatccggaacgcgaaga
gacgcgaaggacgcggcgttggattggctcgtgttaaacgtcccggagtcgcggctgccg
aggacgttcgccccggacgcgaagagcgacggcgtggtgttgatggacaccgccgccgcg
ttcgcgcccgcggggtcgaaggcggggagtgacggcggcggtttcggcggatcgaaaccg
aaaccgaagcgtccagagcgtcgcgcggcggaggcgaggccgtcggacgcggacgccgcg
tggctttgggaccgcgggtacaccgcggcggaggcgagcgacgcgctggcggccgcggac
ggcggcggtcgcgaccgcgcgctggaggcgctgtttcgcgagacgctcgtccgcgcgacg
gacgggagggattggagcgcgtggccgtcgaccggcggcggcggcggcgaacgcggcggc
ggcggcggcggcggcgacgacgacgacgacggcggcgacgatccgtgggaagacgagctc
gtcgccgtcgaggccatcttcggcgacgacgtcgtctcgcgcccgtcccgcgacgtcgtg
atcgtgaccgtggacgtggacgacggccgcggtgggaaaggtaaggtcgcgctggaggtg
cggaggccctcggggggaggctacccgacggaggagccgccgacgatttcgttggcggcg
gcttccggcgacggcgcgacgtctcgaggggcgctgcgcgcggcgacggcgtcgctcgcc
gccgccgcggccgccgccgccgaggacgggatcccgtgcgtgcacagcctcgcggagttg
ctcccgggggcgttggccgagcgcgcggacgcgccggcgccgggagaaggcgcgggggaa
gaggaggaagaggaggaggaggagaccgacgccgtgaaggaagaaaaggaagaaatcgtc
gtcggcgcggcgaaggcgtcgtcgtcttccatcccggccccgcgcgcgggcgtcgccgtc
gtcgccgcgccgccgcgcgcgtcctcgacgcccacgaagtcggcacccaaagtcggcacc
cgggggaccgaccgagatcgaaaccgcccccgcggccgcgacgccgcgttgtccccgtcg
gaggcggcggcggagagcgcgcgtctgaaagccgcgcaggagtcctacttcagcggaggc
ggcgggagcggcgcagcgtccaagatggtcgccaccagggcgaacctcccggcgtcggcg
tcgcgcgaagaggtggtccgcgcggtcgacggctcccccgtcgtcgtcttatccggcgag
acgggctgcgggaaatccacgcaagtgccgcagttcatcttggagagcgcgatcgataag
cgcgctggcgggtcgtgcaacatcgtgtgcacgcaaccgcggcggatcagcgcgatcggg
ctcgcggagcgcgtcgcgagcgagcgcgtggagaactgcggcgacgtcgtcggcgtcacg
cacgtcgtcctagacgaagtccacgagcggagcgtcgagagcgatctgttgctgctgttg
ctccgacgcgtgatatgcggcgcgaggaaagatttgaagatcgtgctcatgtccgccacc
gccgacgcggatttcttcgcggcgtatttctcagagcccagcgccgcgagcgtcgccgcc
ggcggcgtcgtcgcgacgccgtcctcgaaggtgttcatcgaagggttcacgcacccggtg
cgggagtacttcttggaggacgtcctcgagttgaccgggtacgcgatcggtaaggcgagt
aaatacgcgaagaagaagggaagcggcggcggcggcggcggtgaggacatcctgttgatc
gataccgtcgagatgcgcgccgacgccgacgccgccaccgacgccgccgacgccgacgcc
gtcgccgacgccgacgccgcggacgacgccgcgtcgcccgcgccgcccgtcgaggaggag
gacgtcccggagacctgggaagagacccccgaggaccgcgtcgcgccgaccgcgaccgcg
acgtccgacgacgccacgtcagcgtccgacacactctgggacaccgacgccgacgcgacg
cgggcgcgcgcgagagcggcgaagacgggcgccgcgcgcgcggacgccgccgcggacgac
gccgcgagggcgaaacgcgacgaactcgcgttcgcgtcggcgaacctcgcgaacgaagcg
tcgtacggcgaagccacgcgacgatcgatcgcgaacgtggacgagtcgctgttaaactac
gagctcatcgagcggttgatcgcgaagatcattcgcgtggagctcagcgaaggcgagcgc
gcgctcgtcgcgccgtccgccgcgcccgggagaggagggaaacgatcgcccggggagagc
gactcgaagggcgcgattctcgtctttcttcccgggcaagcggagatcaatcggttgatt
cgccagctcgagcgttcgcagttcctggagccgcacgacgtcggcgagctgctgttcctc
ccgctgtacggcgccctgagcggcgcggaccagcgcaaaatcttcgcgcctcccccgcgc
ggcgcgaggaagatcgtcgtcgcgacgaacatcgccgagacgtcggtgaccatcgacgac
gtgcgctacgtcgtcgacgccggccacacaccgcgacgcctttcaactccgcttctgacg
cctttcgactccaccccgacgtttgtcgcttcgcgcggaccctcgaccctcagccacgat
tcgactcgcgggatgagcgtcctcgcggacgcgtgggtgtcgagagccgcggcgaagcag
cgacgcgggcgcgccgggcgcgtctcccccggcgctcgcttcgcgctcttctcgcgcgcg
caattcgcgcgcatgagcgatcaccagccgccggagatgcttcgcacgccgctgcagcag
ctgtgtttgaacgtcaaggcgatggcgcccggggttggggtggagacgacgctgtgcgcg
gcgccgacgccgccgccgcgcgacgccgtgcgcgcggcgttggacgagctgatggcgttg
cgagcgctggacgtgcgccgcgacagtgccacgtcggcgtcgtccgacggcgcggtatcg
tccgacgcggaaaaacatccaaacaatccggaaacgctgacgccgctcggaaaacacctc
gcgcacatgcccgtggacgcgcgcgtgggcaagatgctcctgttcggcgcgctgctcggc
tgtctcgaccctatcctcacgatcgcggcggcgatgagcggacgccagctgttcgtgtcg
ccgaaggataagaaagccgaggcggacgcgatgaagaaaaaaattgccgcgccgggaaag
agcgaccatctcacgatggcgtccgcctacgcggcgtggtggaagtgcccgggcgcgggc
gcgcgacgcaagcacgcggacgagcggttcttatcgcaccaggcgctggaggggatcatg
gcgagccggttggattacgccggggtgttggcggacctggggttcattcctcgcgtgtac
gtgcgcgcgatgcgacgcgacggcgccggcggcggcgacgccgaccgcaacgcttctgtc
gcgcgcgtcgtgaaagccgcgctcgtcgcggggttctacccgcaagtcgtcagggtccag
cacccggagacgaagttcgtgaacaccgcggggggcgcgcgagagaaggagagcgtcgac
gggagaggggtaaaatatttctgcaaagacgtcggacgcgtctttcttcacccgagcagc
gtcaacgtcgcctccgggaagttcgactccccgtggctcgtgtacagcgagcgcgtcgag
accgcgagggtgtacgtccgggataacaccatggtcggcgcgtacgcgctgctgctgttc
ggcggcgagctcgtcgtcgatcacgcgagggggcggctgtcgatggacggatgggcggaa
ttcgacgcgcccgcgcgcgtcggcgtgctcgttcgcgagatgcgcgcggcggtggacgcg
ctgttagagaaacatatcgaccaaccgcgcgaggaggacggggacggggacgacgactcg
atgaagctcgcgagcagcccggtcgtgaaggcgctcctggagcttctcgcgagcgagggg
cgctag

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