KEGG   Micromonas pusilla: MICPUCDRAFT_48340
Entry
MICPUCDRAFT_48340 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K14004  protein transport protein SEC13
Organism
mpp  Micromonas pusilla
Pathway
mpp03013  Nucleocytoplasmic transport
mpp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUCDRAFT_48340
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MICPUCDRAFT_48340
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_48340
   04131 Membrane trafficking [BR:mpp04131]
    MICPUCDRAFT_48340
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     MICPUCDRAFT_48340
Membrane trafficking [BR:mpp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    MICPUCDRAFT_48340
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    MICPUCDRAFT_48340
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    MICPUCDRAFT_48340
SSDB
Motif
Pfam: Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st Beta-prop_WDR5 WD40_Prp19 Beta-prop_WDR3_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_RIG_2nd Beta-prop_WDR3_2nd Beta-prop_TEP1_2nd Beta-prop_EIPR1 ANAPC4_WD40 WD40_Gbeta WD40_MABP1-WDR62_2nd WDR55 Beta-prop_WDR41 EIF3I Beta-prop_IFT140_1st Beta-prop_WDR36-Utp21_2nd Kelch_1 Beta-prop_WDR75_1st
Other DBs
NCBI-GeneID: 9687030
NCBI-ProteinID: XP_003061851
JGI: 48340
UniProt: C1N1N4
LinkDB
Position
Unknown
AA seq 312 aa
MSISTQASFESGHVDQIHDCQYDYYGRRVATCSSDRTIKIFDVAGESSAAQQTLIATLTG
HDGPVWMVAWAHPKYGNHLASCSFDNKIIIWKESEQGVFSQAYASPTTLHEASVNAIAWA
PHEHGLVLAAASSDGSASVIAKRADGSWDASKIPGAHSIGCTGVSWAPAAPPGSLVAAGG
NAPAPTVKRLVTGGCDNLAKVWRFDDASNQWKEEHALRAHGDWVRDVAWSANMGLPMNTI
ATCGQDGKVFIWTQNEPGGAWNHRLLNDFGAPVWRLSWSVMGNVLAVSDANNLVTVWKES
VDGKWDQISATE
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcatctcgacccaggcgtcgttcgaaagcgggcacgtggaccagattcacgactgc
cagtacgactactacgggaggcgcgtcgcgacgtgctcgagcgatcgcacgatcaaaatc
ttcgacgtcgcgggcgagtcctccgccgcgcagcagacgctgatcgcgaccctcaccggc
cacgacggcccagtgtggatggtcgcgtgggcgcacccgaaatacggaaatcatctcgcg
tcgtgctcgttcgacaacaagatcatcatctggaaagagtccgagcagggcgtcttctcg
caggcgtacgcgtccccgacgacgctgcacgaggcgagcgtgaacgcgatcgcgtgggcg
ccgcacgagcacggattagtcctcgccgccgcgtcgtcggacggctccgcgagcgtgatc
gcgaaacgcgcggacgggtcgtgggacgcgagcaaaatacccggcgcgcactcgatcggg
tgcacgggcgtgagctgggcgcccgcggcgccgcccgggtcgctcgtcgcggcggggggt
aacgccccagcgccgaccgttaaacggttagtcaccggagggtgcgacaacctcgccaag
gtgtggcgattcgacgacgcgtcgaaccagtggaaggaagagcacgcgctgcgagcgcac
ggggactgggtcagggacgtcgcgtggagcgcgaacatggggctgccgatgaacacgatc
gcgacgtgcgggcaggacggtaaggtgttcatctggacgcagaacgagccggggggggcg
tggaatcaccggcttctgaacgacttcggcgcgccggtgtggaggctgagttggagcgtc
atggggaacgtgctcgcggtgtcggacgcgaacaacctcgtgacggtgtggaaggagagc
gtggacgggaagtgggaccagatctccgcgacggagtga

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