KEGG   Micromonas pusilla: MICPUCDRAFT_48340
Entry
MICPUCDRAFT_48340 CDS       T02696                                 
Symbol
JGI:MicpuC2_48340
Name
(RefSeq) uncharacterized protein
  KO
K14004  protein transport protein SEC13
Organism
mpp  Micromonas pusilla
Pathway
mpp03013  Nucleocytoplasmic transport
mpp04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
   04131 Membrane trafficking [BR:mpp04131]
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
Membrane trafficking [BR:mpp04131]
 Protein recycling
  Rab GTPases and associated proteins
   Rab11 associated proteins
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
 Endoplasmic reticulum (ER) - Golgi transport
  Forward pathways
   Coat protein complex II (COP-II)
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
 Autophagy
  Other autophagy associated proteins
   SEACAT/GATOR2 complex
    MICPUCDRAFT_48340 (JGI:MicpuC2_48340)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Kelch_1
Other DBs
NCBI-GeneID: 9687030
NCBI-ProteinID: XP_003061851
JGI: 48340
UniProt: C1N1N4
LinkDB
Position
Unknown
AA seq 312 aa
MSISTQASFESGHVDQIHDCQYDYYGRRVATCSSDRTIKIFDVAGESSAAQQTLIATLTG
HDGPVWMVAWAHPKYGNHLASCSFDNKIIIWKESEQGVFSQAYASPTTLHEASVNAIAWA
PHEHGLVLAAASSDGSASVIAKRADGSWDASKIPGAHSIGCTGVSWAPAAPPGSLVAAGG
NAPAPTVKRLVTGGCDNLAKVWRFDDASNQWKEEHALRAHGDWVRDVAWSANMGLPMNTI
ATCGQDGKVFIWTQNEPGGAWNHRLLNDFGAPVWRLSWSVMGNVLAVSDANNLVTVWKES
VDGKWDQISATE
NT seq 939 nt   +upstreamnt  +downstreamnt
atgagcatctcgacccaggcgtcgttcgaaagcgggcacgtggaccagattcacgactgc
cagtacgactactacgggaggcgcgtcgcgacgtgctcgagcgatcgcacgatcaaaatc
ttcgacgtcgcgggcgagtcctccgccgcgcagcagacgctgatcgcgaccctcaccggc
cacgacggcccagtgtggatggtcgcgtgggcgcacccgaaatacggaaatcatctcgcg
tcgtgctcgttcgacaacaagatcatcatctggaaagagtccgagcagggcgtcttctcg
caggcgtacgcgtccccgacgacgctgcacgaggcgagcgtgaacgcgatcgcgtgggcg
ccgcacgagcacggattagtcctcgccgccgcgtcgtcggacggctccgcgagcgtgatc
gcgaaacgcgcggacgggtcgtgggacgcgagcaaaatacccggcgcgcactcgatcggg
tgcacgggcgtgagctgggcgcccgcggcgccgcccgggtcgctcgtcgcggcggggggt
aacgccccagcgccgaccgttaaacggttagtcaccggagggtgcgacaacctcgccaag
gtgtggcgattcgacgacgcgtcgaaccagtggaaggaagagcacgcgctgcgagcgcac
ggggactgggtcagggacgtcgcgtggagcgcgaacatggggctgccgatgaacacgatc
gcgacgtgcgggcaggacggtaaggtgttcatctggacgcagaacgagccggggggggcg
tggaatcaccggcttctgaacgacttcggcgcgccggtgtggaggctgagttggagcgtc
atggggaacgtgctcgcggtgtcggacgcgaacaacctcgtgacggtgtggaaggagagc
gtggacgggaagtgggaccagatctccgcgacggagtga

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