Micromonas pusilla: MICPUCDRAFT_48404
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Entry
MICPUCDRAFT_48404 CDS
T02696
Name
(RefSeq) transcription elongation-nucleosome displacement protein Spt5
KO
K15172
transcription elongation factor SPT5
Organism
mpp
Micromonas pusilla
Pathway
mpp03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mpp00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
MICPUCDRAFT_48404
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mpp03021
]
MICPUCDRAFT_48404
03019 Messenger RNA biogenesis [BR:
mpp03019
]
MICPUCDRAFT_48404
Transcription machinery [BR:
mpp03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
MICPUCDRAFT_48404
RNA polymerase I system
MICPUCDRAFT_48404
Messenger RNA biogenesis [BR:
mpp03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
MICPUCDRAFT_48404
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spt5-NGN
KOW1_SPT5
KOW5_SPT5
Spt5_N
KOWx_SPT5
KOW2_Spt5
KOW4_SPT5
KOW
KOW7_SPT5
DUF7609
CTD
Motif
Other DBs
NCBI-GeneID:
9687389
NCBI-ProteinID:
XP_003062151
JGI:
48404
UniProt:
C1N1P1
LinkDB
All DBs
Position
Unknown
AA seq
1290 aa
AA seq
DB search
MSDAEAETAAEEKPRVKEDDAEEKKKSEEAGESGGESGDDDDDDANVGSEDESGSDDDAS
DDDEDDDEEEEEEDEDEEDEDEKPAKPKKPAAASDDDEDGEVKAEPAGDDDGDGSDDGEI
MTAAKAKAQKAAKKKEKEKKRSRNQFVDDVADDDDDDGARKRKKKKGKKSGKDGRPGGNM
FIDDMADVEDDDEEEDDEGDDIDEDLGEEEREAVMREAEQRVHARYENLERMERMENEEE
LEAALKERYAAHRAAADYGDVGIGTEVDQQALHPTVRDPKLWLVTVKQGKEREVVVCLMQ
KAINLHRSGKGAMAIKSAVVQDHLKSYVYVEAEREDHVKKALAGLRHVYHSKPIKLVPIA
EMVESVTVTKKKVSNIKMGSWVRMRGGAYKGDLAKIVDVNFADNQCTVKLVPRFDYAHLQ
AKEEGTHQGRKKANLRPPARLFTEAMSAKYNLPLERSRHDRRMRANVDVLCGQHKLMDGY
YVKTISLASCKLADAPALDELQRFSTGEEATEAKTSDGGRANAAANLEALASSLEGAAKR
EQNFLPGDHVICVDGDLVNLTGVVVHDNADGSVKITPTHDDIHEDIDVDKQTLRKYFKVG
SHVRCVHGVHDGESGLVVKVEGQVTTVFSDVKQEEFLVFSQDLADSKEVTRRVESIGVFT
IHDLVQLESSAVGMIVRVEKDAAMVMMASSTADRPDVRPVKLHDMRRKLMDRRVTASDAG
METIENGSMVRIVDGPGKGMRLTVKHINRGTLWGKVRGDVADFGGIVAVKARSCRVDGSK
SKDGGNDANRAGGFAAAPQSPGAALLRSPAARQQPMQMQDAPRAGRFGGGPVGRRDNSLV
GTTIKVSAGVYKGYKGKVVDATETTVRVELQAQARTVTVQRNQIVMPSAAPPWGGAAAAP
AAYQPAAPATAPTPARTPMREYARTPAYGDGIGSVTPLRDDGAGGRTPLRDSAWNPATPH
HDGGVGGGGWDDDAPSTASAPAPSSDPDAGYAGVFVTKAVVSLPDGRQGVVRARKNGAVV
VAIGTTKTLPNGVVTLDALTSASAMETVPESVLTLAPAQKKDNVVVVTSGEEQPRGATAV
VISVDEGECVMKMDGTKEAAMMPATAIARVPIPFSALDRTFTTIPLLSHGASSPALPPLV
PAASEPGFGFGVAACASFAAIPRRMISWSAEGLAPARLDASPAAASDATLCAFLKTSSAF
ASPAAPASARAPTSVLTRLFAMDSFMCASSSPRLSSVAAAATFAESGRFRLARSICSAMR
RAARSSSSSSARSRFAFIAWRIFSSLSSGR
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgagcgacgccgaagcggagaccgcggccgaggagaagccgcgcgtgaaggaggacgac
gccgaggagaagaagaaatccgaggaggcgggggaatcgggcggcgaatccggcgacgac
gacgacgacgacgcgaacgtcgggtccgaagacgagtccgggtccgacgacgacgcctcg
gacgacgacgaggatgacgacgaggaggaggaggaggaggacgaggacgaggaagacgag
gacgagaagcccgcgaagccgaagaagcccgccgccgcgtccgacgacgacgaggacggc
gaagtcaaggcggagcccgcgggcgacgacgacggcgacggctccgacgacggcgagatc
atgaccgcggcgaaagcgaaggcgcagaaggcggcgaagaaaaaggagaaggagaagaag
cgatcgcggaaccagttcgtggacgacgtcgcggacgacgacgacgacgacggcgcgagg
aagaggaagaaaaagaagggcaagaagtccggcaaagacggcaggcccggcgggaacatg
ttcatcgacgacatggcggacgtcgaggacgacgacgaggaagaggacgacgagggcgac
gacatcgacgaggacctcggcgaggaggagcgggaggcggtgatgcgcgaggcggaacaa
cgcgtgcacgcgaggtatgaaaacctcgaacggatggaacgcatggagaacgaggaggag
ctcgaggcggcgctcaaggagcggtacgccgcgcaccgcgccgccgcggactacggcgac
gtcgggatcggcacggaggtggaccagcaagcgctgcacccgacggtgcgggacccgaag
ctgtggctggtcacggtgaagcagggcaaggaacgcgaggtggtcgtgtgcctcatgcag
aaggcgatcaacctgcacagatccgggaagggcgccatggcgatcaagtccgcggtcgtt
caggatcacctcaagtcctacgtgtacgtcgaagccgagcgcgaggaccacgtcaagaag
gcgctggcgggactacggcacgtgtaccactcgaaaccgatcaagctcgtgcccatcgcg
gagatggtggagtccgtcaccgtgacgaagaagaaggtgtcgaacatcaagatggggtcg
tgggtgcgcatgcgcggcggtgcgtacaagggcgacctcgcgaagatcgtggacgtgaac
ttcgcggacaaccagtgcacggtaaagctcgtccctcgctttgactacgcgcaccttcag
gcgaaagaggaggggacgcaccagggtcgaaagaaggccaacttgcggccgcccgcgcgt
ctgttcaccgaggcgatgtccgcgaagtacaacctcccgttggagcgctcgaggcacgac
cgtcgcatgcgcgcgaacgtggacgtcctgtgcggccagcataagctcatggacgggtac
tacgtcaagacgatctctctcgcgtcgtgcaagctggcggacgcgccggcgttggacgag
ctccagcgattctccacgggcgaggaggcgacggaggcgaagacgagcgacggcggcaga
gcgaacgcggcggcgaacttggaggcgctcgcgagctccctggagggcgccgcgaagagg
gagcagaacttcctccccggcgatcacgtcatctgcgtcgacggagacctcgtcaacctc
accggcgtcgtcgtgcacgacaacgcggacggctccgtgaagatcacgccgacgcacgac
gacatccacgaagacatcgacgtggacaagcagacgttgaggaagtacttcaaggttggg
tcgcacgtgcggtgcgtgcacggcgtgcacgacggcgagtctggtctcgtcgtgaaagtg
gaggggcaagtcacgacggtgttctccgacgtcaagcaggaggagttcctcgtgttctcg
caagacctcgcggacagcaaagaggtcaccagaagagtcgagagcatcggggttttcacg
atccacgacctcgtccagctcgaatcttccgccgtcgggatgatcgtcagagtggagaag
gacgccgcgatggtgatgatggcgagcagcaccgcggatcgaccggacgtccgcccggtt
aagctccacgacatgcgtcggaagctcatggataggagggtcaccgcctcggacgccggg
atggagacgatcgagaacgggtcgatggtgaggatcgtcgacggcccggggaaagggatg
cggctcacggtgaagcacatcaaccgagggacgctgtgggggaaggttcgcggcgatgtc
gcagatttcggcggcatcgtcgcggtcaaggcgcggagctgccgcgtcgacggctccaag
agcaaagacggcggaaacgacgccaacagagccggcgggttcgccgcggcgccgcagtcc
cccggcgccgcgctgctccgctcgcccgcggcgcgccagcaaccgatgcagatgcaggac
gcgccgcgcgccgggcggttcggcggcggccccgtcgggaggcgcgacaactcgcttgtc
gggacgacgatcaaagtcagcgcgggggtgtacaaagggtacaagggcaaggtcgtggac
gcgacggagacgaccgtccgcgtggagctccaagcgcaagcgcgcacggtcacggtgcag
cggaaccagatcgtcatgccgagcgcggcgccgccgtggggcggcgccgccgcggcgccg
gcggcgtaccagcccgccgcgcccgcgacggcgccgacgcccgcgcgtacgccgatgcgc
gagtacgcgcggacgcccgcgtacggcgacggcatcggctccgtcacgccgctgcgcgac
gacggcgcgggcggcagaaccccgctgcgcgacagcgcgtggaacccggcgacgccgcac
cacgacggcggcgtcggcggcggcggatgggacgacgacgcgccgtcgacggcgtcggcg
cccgcgccgtcgtcggacccggacgccgggtacgccggcgtgttcgtcaccaaggcggtc
gtctctctcccggacgggagacagggcgtcgtccgcgcgcggaagaacggcgccgtggtc
gtcgcgatcgggacgacgaagacgctcccgaacggcgtcgtcaccctggacgcgctcacg
tctgcgagtgcgatggagacggtgcccgagagcgtgttgacgctggcgcccgcgcagaag
aaggacaacgttgtcgtggtgacgtccggggaggagcagccgcgcggtgccaccgcggtg
gtcatctccgtggacgagggcgagtgcgtgatgaagatggacgggacgaaggaggcggcg
atgatgcccgcgacggcgatcgcgcgcgtcccgatccccttcagcgccttggacaggacc
ttcacgacgatccctctcttgagccacggcgcgtcgtccccggcgctgccgccgctcgtc
ccggcggcgtcggagccggggttcggattcggcgtcgccgcgtgcgcttccttcgccgcg
atcccgcgccgcatgatctcctggagcgcggagggcttggcgcccgcgcgtttggacgcg
agccccgcggcggcgtcggacgcgaccctctgcgcgttcttgaagacgtccagcgcgttc
gcgtccccggccgcgcccgcgagcgcgagggcgccgacgtccgtcttgacgcgtttgttc
gctatggacagcttcatgtgcgcgtcgtcgtcgccgcgtttgagctccgtcgcggcggcg
gcgactttcgccgagtcgggaaggtttcgattggcgcgctcgatctgctccgcgatgaga
cgcgccgcgcgctcctcttcgtcctcctccgcgcgctcgcgcttcgctttcatcgcctgg
cgcatcttctcctctttgtcctcggggcgatag
DBGET
integrated database retrieval system
