KEGG   Micromonas pusilla: MICPUCDRAFT_49335
Entry
MICPUCDRAFT_49335 CDS       T02696                                 
Name
(RefSeq) uncharacterized protein
  KO
K12602  WD repeat-containing protein 61
Organism
mpp  Micromonas pusilla
Pathway
mpp03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mpp00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    MICPUCDRAFT_49335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mpp03019]
    MICPUCDRAFT_49335
Messenger RNA biogenesis [BR:mpp03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Ski complex
     MICPUCDRAFT_49335
SSDB
Motif
Pfam: WD40 Beta-prop_WDR5 Beta-prop_THOC3 WD40_WDHD1_1st Beta-prop_WDR3_1st WD40_Prp19 WD40_CDC20-Fz WDR55 Beta-prop_WDR3_2nd Beta-prop_WDR36-Utp21_2nd Beta-prop_EML_2 WD40_Gbeta Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_2nd ANAPC4_WD40 EIF3I Beta-prop_WDR75_1st Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR36-Utp21_1st WDR90_beta-prop_4th Beta-prop_EIPR1 Beta-prop_ACSF4 WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_RIG_2nd Beta-prop_VPS8 Beta-prop_EML Beta-prop_SCAP Beta-prop_IFT122_1st Beta-prop_Vps41 Beta-prop_WDR35_TULP_N Cytochrom_D1 Beta-prop_TEP1_C Beta-prop_Aladin Beta-prop_NUP159_NUP214 Beta-prop_HPS5 CFAP43_N Chal_sti_synt_N WD40_CFAP43
Other DBs
NCBI-GeneID: 9690192
NCBI-ProteinID: XP_003064751
JGI: 49335
UniProt: C1NA88
LinkDB
Position
Unknown
AA seq 189 aa
MPLPRATGGGDGGKGAAGGGSSRFAHSIAFSPDGRRVVCGAMDGTVAVFDVPSRKLLHTL
EGHAMPVRGVCFSVDSKTAFTACDDGYVHAYDVETRSLTQSFPGHDAWALSVAASPCGRA
VVSCGADGTVKLWDLTQGLGVGGKMAQSVSDVSDATWGACFKPGTGGGGGGRLAAVGDDA
SVCLYDFTA
NT seq 570 nt   +upstreamnt  +downstreamnt
atgccgctgccgagagcgacgggaggaggcgacggcgggaaaggggcggcgggtggggga
tcgtcgcgattcgcgcattcgatcgctttttcgcccgacggtagacgcgtcgtgtgcggc
gccatggacggcacggtggccgtcttcgacgtcccctcgaggaagcttctgcacacgctc
gaaggccacgcgatgccggtccgaggcgtgtgcttcagcgtcgactcgaagacggcgttc
accgcgtgcgacgacggatacgtccacgcctacgacgtcgagacgaggtcgctgacgcaa
tcgttcccggggcacgacgcgtgggcgctgagcgtcgccgcgagcccgtgcggccgcgcc
gtcgtcagctgcggcgcggacggcaccgtgaagctgtgggatctcacgcagggtctgggt
gtgggggggaagatggcgcagagcgtgtcggacgtgtcggacgcgacgtggggcgcgtgt
ttcaagccggggaccggaggcggaggcggggggcggctggccgccgtcggcgacgacgcg
tcggtgtgcctatacgacttcaccgcgtga

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